RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 HERC6Q8IVU3 1022 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 PRSS3P2Q8NHM4 247 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 CEP70Q8NHQ1 597 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 PIGOQ8TEQ8 1089 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 RILPL2Q969X0 211 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 UBXN10Q96LJ8 280 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 EIF2AK1Q9BQI3 630 aaKnown RBP4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 SLC29A3Q9BZD2 475 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 PLEKHA2Q9HB19 425 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 MOV10Q9HCE1 1003 aaKnown RBP4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 TXNRD2Q9NNW7 524 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 PAPOLBQ9NRJ5 636 aaKnown RBP4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 SLC25A13Q9UJS0 675 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 RCE1Q9Y256 329 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 TNFSF13BQ9Y275 285 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 PKP3Q9Y446 797 aa4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 SETD1BQ9UPS6 1966 aaKnown RBP4.06□□□□□ -1.76
TRAPPC13-204ENST00000438419 RRN3P2A6NIE6 340 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 CCNT1O60563 726 aaKnown RBP4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 TOP3BO95985 862 aaKnown RBP4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 PYGLP06737 847 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 CTSAP10619 480 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 CDK4P11802 303 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 ACP5P13686 325 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 HOXB9P17482 250 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 RXRAP19793 462 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 HOXD9P28356 352 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 ZNF81P51508 661 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 ZNF91Q05481 1191 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 THOC5Q13769 683 aaKnown RBP4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 ANKRD1Q15327 319 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 TRIP6Q15654 476 aaKnown RBP4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 ETFDHQ16134 617 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 Q4G0T1 1027 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 ZNF484Q5JVG2 852 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 PAPD7Q5XG87 772 aaKnown RBP4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 ZNF793Q6ZN11 406 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 MMS22LQ6ZRQ5 1243 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 TMEM200AQ86VY9 491 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 ADGRF4Q8IZF3 695 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 ARL14EPQ8N8R7 260 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 USP38Q8NB14 1042 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 WIPF2Q8TF74 440 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 CLMNQ96JQ2 1002 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 ADAD1Q96M93 576 aaKnown RBP4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 TUBB6Q9BUF5 446 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 ARHGAP39Q9C0H5 1083 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 CLPBQ9H078 707 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 SLC22A11Q9NSA0 550 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 RNF7Q9UBF6 113 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 DTX4Q9Y2E6 619 aa4.05□□□□□ -1.76
TRAPPC13-204ENST00000438419 DPPA5A6NC42 116 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 NPIPB13A6NJU9 1138 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 NPIPB5A8MRT5 1133 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 KCNJ18B7U540 433 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 NPIPB4C9JG80 1138 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 CNOT3O75175 753 aaKnown RBP4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 CNPP09543 421 aaKnown RBP4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 CSF1P09603 554 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 PKMP14618 531 aaKnown RBP4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 CNTFP26441 200 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 MMP13P45452 471 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 RPS6KA3P51812 740 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 GOLGA8FQ08AF8 430 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 PGM5Q15124 567 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 RALBP1Q15311 655 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 GXYLT1Q4G148 440 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 LRRC24Q50LG9 513 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 RUNDC3AQ59EK9 446 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 KIAA1755Q5JYT7 1200 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 ISM2Q6H9L7 571 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 CYP26C1Q6V0L0 522 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 ANKRD13BQ86YJ7 626 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 KLBQ86Z14 1044 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 SCN4BQ8IWT1 228 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 ANKRD44Q8N8A2 993 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 KCNJ9Q92806 393 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 RPL36ALQ969Q0 106 aaKnown RBP4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 COG8Q96MW5 612 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 PIMREGQ9BSJ6 248 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 SCNM1Q9BWG6 230 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 TRIM31Q9BZY9 425 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 UBA5Q9GZZ9 404 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 SPRTNQ9H040 489 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 TMEM45AQ9NWC5 275 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 TUBA8Q9NY65 449 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 LRRFIP2Q9Y608 721 aaKnown RBP4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 TMEM247A6NEH6 219 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 STX16-NPEPL1H3BU86 382 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 STX16O14662 325 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 ADAM10O14672 748 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 NCAM2O15394 837 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 PRPF4O43172 522 aaKnown RBP eCLIP4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 MSI1O43347 362 aaKnown RBP4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 TLR2O60603 784 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 TSPAN3O60637 253 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 METTL18O95568 372 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 NFATC1O95644 943 aa4.04□□□□□ -1.76
TRAPPC13-204ENST00000438419 HLA-DQA2P01906 255 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms