RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 CD27P26842 260 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 CD70P32970 193 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 ACSL1P33121 698 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 CSKP41240 450 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 PTGIRP43119 386 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 ACADSBP45954 432 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 PMS1P54277 932 aaKnown RBP8.04□□□□□ -1.12
VPS50-204ENST00000438395 MCCD1P59942 119 aaPredicted RBP8.04□□□□□ -1.12
VPS50-204ENST00000438395 RPS14P62263 151 aaKnown RBP8.04□□□□□ -1.12
VPS50-204ENST00000438395 GCNT1Q02742 428 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 PIK3R6Q5UE93 754 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 TMEM215Q68D42 235 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 PMF1Q6P1K2 205 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 RRAGAQ7L523 313 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 BHLHA9Q7RTU4 235 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 GLRX5Q86SX6 157 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 ADIPOR2Q86V24 386 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 CHSY1Q86X52 802 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 ZC3H3Q8IXZ2 948 aaKnown RBP8.04□□□□□ -1.12
VPS50-204ENST00000438395 DQX1Q8TE96 717 aaKnown RBP8.04□□□□□ -1.12
VPS50-204ENST00000438395 SLC35F5Q8WV83 523 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 NELFBQ8WX92 580 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 TFAP2BQ92481 460 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 ERCC4Q92889 916 aaPredicted RBP8.04□□□□□ -1.12
VPS50-204ENST00000438395 RNF34Q969K3 372 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 IGSF8Q969P0 613 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 TIGD1Q96MW7 591 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 OMDQ99983 421 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 TMEM245Q9H330 911 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 FAM204AQ9H8W3 233 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 IL21RQ9HBE5 538 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 TM9SF3Q9HD45 589 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 PRSS16Q9NQE7 514 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 AASDHPPTQ9NRN7 309 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 FBXL12Q9NXK8 326 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 FTSJ1Q9UET6 329 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 RALYQ9UKM9 306 aaKnown RBP8.04□□□□□ -1.12
VPS50-204ENST00000438395 CTNND2Q9UQB3 1225 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 TLR6Q9Y2C9 796 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 ANKRD6Q9Y2G4 727 aa8.04□□□□□ -1.12
VPS50-204ENST00000438395 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.04□□□□□ -1.12
VPS50-204ENST00000438395 PCNX2A6NKB5 2137 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 EDDM13A0A1B0GTR0 161 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 GOLGA6L7A0A1B0GV03 622 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 F5H5T6 163 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 PMM2O15305 246 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 THAP12O43422 761 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 DFNA5O60443 496 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 RNASEH2AO75792 299 aaKnown RBP8.03□□□□□ -1.12
VPS50-204ENST00000438395 LETM1O95202 739 aaPredicted RBP8.03□□□□□ -1.12
VPS50-204ENST00000438395 IGLV3-27P01718 113 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 AFPP02771 609 aaKnown RBP8.03□□□□□ -1.12
VPS50-204ENST00000438395 SLC2A3P11169 496 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 ABCB4P21439 1286 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 USP8P40818 1118 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 SCTRP47872 440 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 PSMD8P48556 350 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 SGSHP51688 502 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 OXCT1P55809 520 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 RPS24P62847 133 aaKnown RBP8.03□□□□□ -1.12
VPS50-204ENST00000438395 SCAPQ12770 1279 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 PAK1Q13153 545 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 CST6Q15828 149 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 KIF19Q2TAC6 998 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 HNRNPA1L2Q32P51 320 aaKnown RBP8.03□□□□□ -1.12
VPS50-204ENST00000438395 SLC45A4Q5BKX6 768 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 FAM133BQ5BKY9 247 aaKnown RBP8.03□□□□□ -1.12
VPS50-204ENST00000438395 RABGAP1LQ5R372 815 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 KIAA0895LQ68EN5 471 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 ISM2Q6H9L7 571 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 USP30Q70CQ3 517 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 DSG4Q86SJ6 1040 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 PROSER1Q86XN7 944 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 DHX40Q8IX18 779 aaKnown RBP8.03□□□□□ -1.12
VPS50-204ENST00000438395 LGI2Q8N0V4 545 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 GALNT15Q8N3T1 639 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 UBR7Q8N806 425 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 ATP6V0D2Q8N8Y2 350 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 FIBINQ8TAL6 211 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 AZIN2Q96A70 460 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 BIRC7Q96CA5 298 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 PRICKLE1Q96MT3 831 aaPredicted RBP8.03□□□□□ -1.12
VPS50-204ENST00000438395 NOX5Q96PH1 765 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 MED15Q96RN5 788 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 PPP1R9BQ96SB3 815 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 INTS2Q9H0H0 1204 aaKnown RBP8.03□□□□□ -1.12
VPS50-204ENST00000438395 PABPC3Q9H361 631 aaKnown RBP8.03□□□□□ -1.12
VPS50-204ENST00000438395 OSGEPQ9NPF4 335 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 TPX2Q9ULW0 747 aaKnown RBP8.03□□□□□ -1.12
VPS50-204ENST00000438395 SNX11Q9Y5W9 270 aa8.03□□□□□ -1.12
VPS50-204ENST00000438395 BAHCC1Q9P281 2608 aa8.02□□□□□ -1.12
VPS50-204ENST00000438395 SLC35F4A4IF30 521 aa8.02□□□□□ -1.13
VPS50-204ENST00000438395 BIN1O00499 593 aa8.02□□□□□ -1.13
VPS50-204ENST00000438395 YKT6O15498 198 aa8.02□□□□□ -1.13
VPS50-204ENST00000438395 TNFSF14O43557 240 aa8.02□□□□□ -1.13
VPS50-204ENST00000438395 PCDHGA12O60330 932 aa8.02□□□□□ -1.13
VPS50-204ENST00000438395 CBFA2T3O75081 653 aa8.02□□□□□ -1.13
VPS50-204ENST00000438395 SIN3BO75182 1162 aa8.02□□□□□ -1.13
VPS50-204ENST00000438395 LUC7L3O95232 432 aaKnown RBP8.02□□□□□ -1.13
VPS50-204ENST00000438395 SRPRAP08240 638 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms