RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 ITM2CQ9NQX7 267 aa18.33■□□□□ 0.52
NCSTN-208ENST00000438008 SEMA4GQ9NTN9 838 aa18.33■□□□□ 0.52
NCSTN-208ENST00000438008 USP36Q9P275 1121 aaKnown RBP18.33■□□□□ 0.52
NCSTN-208ENST00000438008 PPARGC1AQ9UBK2 798 aaKnown RBP18.33■□□□□ 0.52
NCSTN-208ENST00000438008 OR51B4Q9Y5P0 310 aa18.33■□□□□ 0.52
NCSTN-208ENST00000438008 BCLAF3A2AJT9 711 aaKnown RBP18.32■□□□□ 0.52
NCSTN-208ENST00000438008 MAP3K13O43283 966 aa18.32■□□□□ 0.52
NCSTN-208ENST00000438008 FOXD2O60548 495 aaPredicted RBP18.32■□□□□ 0.52
NCSTN-208ENST00000438008 IGLV3-19P01714 112 aa18.32■□□□□ 0.52
NCSTN-208ENST00000438008 CTSOP43234 321 aaPredicted RBP18.32■□□□□ 0.52
NCSTN-208ENST00000438008 HNRNPA1L2Q32P51 320 aaKnown RBP18.32■□□□□ 0.52
NCSTN-208ENST00000438008 PLA2G2CQ5R387 149 aa18.32■□□□□ 0.52
NCSTN-208ENST00000438008 DCUN1D2Q6PH85 259 aa18.32■□□□□ 0.52
NCSTN-208ENST00000438008 KIAA1324Q6UXG2 1013 aaKnown RBP18.32■□□□□ 0.52
NCSTN-208ENST00000438008 ZNF366Q8N895 744 aa18.32■□□□□ 0.52
NCSTN-208ENST00000438008 RNF214Q8ND24 703 aa18.32■□□□□ 0.52
NCSTN-208ENST00000438008 PRCCQ92733 491 aaPredicted RBP18.32■□□□□ 0.52
NCSTN-208ENST00000438008 RETREG1Q9H6L5 497 aa18.32■□□□□ 0.52
NCSTN-208ENST00000438008 ZNF212Q9UDV6 495 aa18.32■□□□□ 0.52
NCSTN-208ENST00000438008 TARSL2A2RTX5 802 aaKnown RBP18.31■□□□□ 0.52
NCSTN-208ENST00000438008 CCP110O43303 1012 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 SRGAP2O75044 1071 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 ZNF806P0C7X5 589 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 MYBL1P10243 752 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 HNRNPH3P31942 346 aaKnown RBP18.31■□□□□ 0.52
NCSTN-208ENST00000438008 CASP14P31944 242 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 SCAPQ12770 1279 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 TDRD12Q587J7 1177 aaKnown RBP18.31■□□□□ 0.52
NCSTN-208ENST00000438008 MANEALQ5VSG8 457 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 RNF219Q5W0B1 726 aaPredicted RBP18.31■□□□□ 0.52
NCSTN-208ENST00000438008 SPECC1LQ69YQ0 1117 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 TRIM11Q96F44 468 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 ZYG11BQ9C0D3 744 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 MPP6Q9NZW5 540 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 OR12D3Q9UGF7 316 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 ADAMTS1Q9UHI8 967 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 SLCO3A1Q9UIG8 710 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 USP18Q9UMW8 372 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 CYP8B1Q9UNU6 501 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 CKAP5Q14008 2032 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 FRYLO94915 3013 aa18.31■□□□□ 0.52
NCSTN-208ENST00000438008 PLXND1Q9Y4D7 1925 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 AP5Z1O43299 807 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 RHOCP08134 193 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 MPLP40238 635 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 NNMTP40261 264 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 AIF1P55008 147 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 OGDHQ02218 1023 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 LMNB2Q03252 620 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 ZBTB16Q05516 673 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 TRIM14Q14142 442 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 C6orf118Q5T5N4 469 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 ZNF783Q6ZMS7 281 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 VPS36Q86VN1 386 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 DNAAF5Q86Y56 855 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 DRC7Q8IY82 874 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 TMEFF1Q8IYR6 380 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 CCDC185Q8N715 623 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 FNIP1Q8TF40 1166 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 RSPH9Q9H1X1 276 aaPredicted RBP18.3■□□□□ 0.52
NCSTN-208ENST00000438008 CD93Q9NPY3 652 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 VPS45Q9NRW7 570 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 CNOT8Q9UFF9 292 aaKnown RBP18.3■□□□□ 0.52
NCSTN-208ENST00000438008 WDR87Q6ZQQ6 2873 aa18.3■□□□□ 0.52
NCSTN-208ENST00000438008 EDDM13A0A1B0GTR0 161 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 TMEM191CA6NGB0 347 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 TTC34A8MYJ7 566 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 PRR5-ARHGAP8B1AHC4 643 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 SIN3BO75182 1162 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 PLEKP08567 350 aaPredicted RBP18.29■□□□□ 0.52
NCSTN-208ENST00000438008 ACADMP11310 421 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 DESP17661 470 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 CD6P30203 668 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 OXTRP30559 389 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 OR1E1P30953 314 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 DHPSP49366 369 aaPredicted RBP18.29■□□□□ 0.52
NCSTN-208ENST00000438008 TPMTP51580 245 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 RPS14P62263 151 aaKnown RBP18.29■□□□□ 0.52
NCSTN-208ENST00000438008 ARHGAP8P85298 464 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 RPL6Q02878 288 aaKnown RBP18.29■□□□□ 0.52
NCSTN-208ENST00000438008 CREB5Q02930 508 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 C9orf64Q5T6V5 341 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 PRR23CQ6ZRP0 262 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 TMC6Q7Z403 805 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 SLFN11Q7Z7L1 901 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 VSTM4Q8IW00 320 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 RPL10LQ96L21 214 aaKnown RBP18.29■□□□□ 0.52
NCSTN-208ENST00000438008 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.29■□□□□ 0.52
NCSTN-208ENST00000438008 MUC3BQ9H195 1237 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 MTG2Q9H4K7 406 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 WSB2Q9NYS7 404 aaPredicted RBP18.29■□□□□ 0.52
NCSTN-208ENST00000438008 VPS28Q9UK41 221 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 SCINQ9Y6U3 715 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 SPAG17Q6Q759 2223 aa18.29■□□□□ 0.52
NCSTN-208ENST00000438008 ILVBLA1L0T0 632 aa18.28■□□□□ 0.52
NCSTN-208ENST00000438008 FAM72CH0Y354 149 aa18.28■□□□□ 0.52
NCSTN-208ENST00000438008 ATMINO43313 823 aaPredicted RBP18.28■□□□□ 0.52
NCSTN-208ENST00000438008 ATP9BO43861 1147 aa18.28■□□□□ 0.52
NCSTN-208ENST00000438008 LRIG2O94898 1065 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms