RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 PPP2R5EQ16537 467 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 GAB4Q2WGN9 574 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 PARP15Q460N3 678 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 TMEM196Q5HYL7 178 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 IL31Q6EBC2 164 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 TRMT11Q7Z4G4 463 aaKnown RBP16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 C12orf40Q86WS4 652 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 UMODL1-AS1Q8N2C9 162 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 SYNPOQ8N3V7 929 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 TSC1Q92574 1164 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 KRT35Q92764 455 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 CHFRQ96EP1 664 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 RNF157Q96PX1 679 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 OSBPL6Q9BZF3 934 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 CIPCQ9C0C6 399 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 TBC1D17Q9HA65 648 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 NDRG2Q9UN36 371 aaKnown RBP16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 PLA2G4CQ9UP65 541 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 SLC8A2Q9UPR5 921 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 EFR3BQ9Y2G0 817 aa16.97■□□□□ 0.31
CTDSPL-204ENST00000435525 USP27XA6NNY8 438 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 TNFRSF10AO00220 468 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 TJP3O95049 919 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 CISD3P0C7P0 127 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 AMPD1P23109 780 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 HLA-FP30511 346 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 CSKP41240 450 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 PEX5P50542 639 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 IRAK1P51617 712 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 GEMIN4P57678 1058 aaKnown RBP16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 ST8SIA6P61647 398 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 MMRN1Q13201 1228 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 PLEKHG6Q3KR16 790 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 SDE2Q6IQ49 451 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 MFSD7Q6UXD7 560 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 LRRC49Q8IUZ0 686 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 SLC35F6Q8N357 371 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 KCNV2Q8TDN2 545 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 FAF2Q96CS3 445 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 SPON2Q9BUD6 331 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 CARD9Q9H257 536 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 ATP13A1Q9HD20 1204 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 LTB4R2Q9NPC1 389 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 SLC25A13Q9UJS0 675 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 PACSIN2Q9UNF0 486 aaPredicted RBP16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 RAD54BQ9Y620 910 aa16.96■□□□□ 0.31
CTDSPL-204ENST00000435525 A0A0A0MRY4 1105 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 KRBA1A5PL33 1030 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 ZSCAN5CA6NGD5 496 aaPredicted RBP16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 FAM170BA6NMN3 283 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 KCNK3O14649 394 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 DCLK1O15075 740 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 TUBB4AP04350 444 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 CD48P09326 243 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 MX2P20592 715 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 CD70P32970 193 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 PTPN7P35236 360 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 CDKN2BP42772 138 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 MARCKSL1P49006 195 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 PLK1P53350 603 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 PITRM1Q5JRX3 1037 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 KAZNQ674X7 775 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 MBLAC2Q68D91 279 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 CXorf57Q6NSI4 855 aaKnown RBP16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 RETSATQ6NUM9 610 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 TXNDC11Q6PKC3 985 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 DCAF4L2Q8NA75 395 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 FLCNQ8NFG4 579 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 ACDQ96AP0 544 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 FEM1AQ9BSK4 669 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 ELOVL2Q9NXB9 296 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 NEU3Q9UQ49 428 aa16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 TCF20Q9UGU0 1960 aaKnown RBP16.95■□□□□ 0.3
CTDSPL-204ENST00000435525 CTAGE9A4FU28 777 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 TMEM221A6NGB7 291 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 C3orf70A6NLC5 250 aaPredicted RBP16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 RASA4BC9J798 803 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 M0R296 226 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 KIF2AO00139 706 aaPredicted RBP16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 DFFAO00273 331 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 DDX3YO15523 660 aaKnown RBP16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 RASA4O43374 803 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 ATG13O75143 517 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 TGM2P21980 687 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 IL4RP24394 825 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 MAGEA9P43362 315 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 NR2C2P49116 596 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 SLC20A2Q08357 652 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 HSF5Q4G112 596 aaPredicted RBP16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 FSCBQ5H9T9 825 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 KIAA0907Q7Z7F0 614 aaPredicted RBP16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 METTL3Q86U44 580 aaKnown RBP16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 PCDH19Q8TAB3 1148 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 WFDC5Q8TCV5 224 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 NSMCE1Q8WV22 266 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 MAIP1Q8WWC4 291 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 ALG3Q92685 438 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 NAPGQ99747 312 aaPredicted RBP16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 FERMT1Q9BQL6 677 aa16.94■□□□□ 0.3
CTDSPL-204ENST00000435525 OSBPL8Q9BZF1 889 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms