RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 USP4Q13107 963 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 CTBP1Q13363 440 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 DPYSL2Q16555 572 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 KYAT1Q16773 422 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 SLC39A12Q504Y0 691 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 SLC9A4Q6AI14 798 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 FAM43BQ6ZT52 329 aaPredicted RBP15.94■□□□□ 0.14
SCARF1-203ENST00000434376 STRA8Q7Z7C7 330 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 GSDMBQ8TAX9 411 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 SPATA13Q96N96 652 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 APBA2Q99767 749 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 PLAC1Q9HBJ0 212 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 VANGL2Q9ULK5 521 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 FZD10Q9ULW2 581 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 ARHGAP42A6NI28 874 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 FYNP06241 537 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 NOS2P35228 1153 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 MCCD1P59942 119 aaPredicted RBP15.94■□□□□ 0.14
SCARF1-203ENST00000434376 IRF9Q00978 393 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 ZBTB17Q13105 803 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 ZRSR2Q15696 482 aaKnown RBP15.94■□□□□ 0.14
SCARF1-203ENST00000434376 TAC4Q86UU9 113 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 ZNF280BQ86YH2 543 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 OMDQ99983 421 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 FERMT1Q9BQL6 677 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 DCLRE1BQ9H816 532 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 WASF2Q9Y6W5 498 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.94■□□□□ 0.14
SCARF1-203ENST00000434376 ANKRD12Q6UB98 2062 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 hCG_2014768A0A024R1R8 64 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 XPO1O14980 1071 aaKnown RBP15.94■□□□□ 0.14
SCARF1-203ENST00000434376 VHLP40337 213 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 POU5F1BQ06416 359 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 CES4AQ5XG92 561 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 ZNF534Q76KX8 674 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 IFNLR1Q8IU57 520 aaPredicted RBP15.94■□□□□ 0.14
SCARF1-203ENST00000434376 CRYBG2Q8N1P7 616 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 NAT14Q8WUY8 206 aa15.94■□□□□ 0.14
SCARF1-203ENST00000434376 OTOFQ9HC10 1997 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 COL1A2P08123 1366 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 SDR42E2A6NKP2 422 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 TCEA3O75764 348 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 DGKIO75912 1065 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 PTPN4P29074 926 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 MSX2P35548 267 aaPredicted RBP15.93■□□□□ 0.14
SCARF1-203ENST00000434376 ACAP1Q15027 740 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 FASTKD1Q53R41 847 aaKnown RBP15.93■□□□□ 0.14
SCARF1-203ENST00000434376 BTBD8Q5XKL5 378 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 OVOS1Q6IE37 1185 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 RPS27LQ71UM5 84 aaKnown RBP15.93■□□□□ 0.14
SCARF1-203ENST00000434376 RYBPQ8N488 228 aaPredicted RBP15.93■□□□□ 0.14
SCARF1-203ENST00000434376 SNX31Q8N9S9 440 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 PHC3Q8NDX5 983 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 SHKBP1Q8TBC3 707 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 C10orf82Q8WW14 230 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 MARK4Q96L34 752 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 COLEC11Q9BWP8 271 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 CADM1Q9BY67 442 aaKnown RBP15.93■□□□□ 0.14
SCARF1-203ENST00000434376 SENP1Q9P0U3 644 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 DNAJC16Q9Y2G8 782 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 STARD13Q9Y3M8 1113 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 TSPAN3O60637 253 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 ENDOD1O94919 500 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 PRKAR2AP13861 404 aaKnown RBP15.93■□□□□ 0.14
SCARF1-203ENST00000434376 PLK1P53350 603 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 NXNQ6DKJ4 435 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 OR10T2Q8NGX3 314 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 MIPEPQ99797 713 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 PNPOQ9NVS9 261 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 EFR3BQ9Y2G0 817 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 LRRC42Q9Y546 428 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 KNL1Q8NG31 2342 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 FCHO1O14526 889 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 PRPF4O43172 522 aaKnown RBP eCLIP15.93■□□□□ 0.14
SCARF1-203ENST00000434376 MAP3K7O43318 606 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 ACADSBP45954 432 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 RAB27AP51159 221 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 ACSBG2Q5FVE4 666 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 FBXO48Q5FWF7 155 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 CLNKQ7Z7G1 428 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.93■□□□□ 0.14
SCARF1-203ENST00000434376 CCNYL1Q8N7R7 359 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 CDKL2Q92772 493 aa15.93■□□□□ 0.14
SCARF1-203ENST00000434376 FCRL3Q96P31 734 aaPredicted RBP15.93■□□□□ 0.14
SCARF1-203ENST00000434376 B2RBV5 119 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 TXNDC9O14530 226 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 AOC2O75106 756 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 TSPAN8P19075 237 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 ATN1P54259 1190 aaPredicted RBP15.92■□□□□ 0.14
SCARF1-203ENST00000434376 DAOAP59103 153 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 WASHC5Q12768 1159 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 EFEMP1Q12805 493 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 PDK1Q15118 436 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 PARP6Q2NL67 630 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 PLD6Q8N2A8 252 aaKnown RBP15.92■□□□□ 0.14
SCARF1-203ENST00000434376 WDR60Q8WVS4 1066 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 CYP2S1Q96SQ9 504 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 KANSL3Q9P2N6 904 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 SHROOM3Q8TF72 1996 aa15.92■□□□□ 0.14
SCARF1-203ENST00000434376 RBM47A0AV96 593 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms