RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 GGA2Q9UJY4 613 aa20.03■□□□□ 0.8
VRK2-205ENST00000432057 ARHGAP42A6NI28 874 aa20.03■□□□□ 0.8
VRK2-205ENST00000432057 RPL17P18621 184 aaKnown RBP20.03■□□□□ 0.8
VRK2-205ENST00000432057 NRG1Q02297 640 aaPredicted RBP20.03■□□□□ 0.8
VRK2-205ENST00000432057 TTC39BQ5VTQ0 682 aaPredicted RBP20.03■□□□□ 0.8
VRK2-205ENST00000432057 NUGGCQ68CJ6 796 aa20.03■□□□□ 0.8
VRK2-205ENST00000432057 C6orf89Q6UWU4 347 aa20.03■□□□□ 0.8
VRK2-205ENST00000432057 PIGWQ7Z7B1 504 aa20.03■□□□□ 0.8
VRK2-205ENST00000432057 BANPQ8N9N5 519 aa20.03■□□□□ 0.8
VRK2-205ENST00000432057 SPATA17Q96L03 361 aa20.03■□□□□ 0.8
VRK2-205ENST00000432057 TEKT5Q96M29 485 aa20.03■□□□□ 0.8
VRK2-205ENST00000432057 VAT1Q99536 393 aa20.03■□□□□ 0.8
VRK2-205ENST00000432057 ELAC2Q9BQ52 826 aaKnown RBP20.03■□□□□ 0.8
VRK2-205ENST00000432057 VN1R3Q9BXE9 311 aa20.03■□□□□ 0.8
VRK2-205ENST00000432057 SLC39A8Q9C0K1 460 aa20.03■□□□□ 0.8
VRK2-205ENST00000432057 CWH43Q9H720 699 aa20.03■□□□□ 0.8
VRK2-205ENST00000432057 TLR8Q9NR97 1041 aaKnown RBP20.03■□□□□ 0.8
VRK2-205ENST00000432057 ATP11BQ9Y2G3 1177 aa20.03■□□□□ 0.8
VRK2-205ENST00000432057 TRIM49D1C9J1S8 452 aa20.02■□□□□ 0.8
VRK2-205ENST00000432057 SUN1O94901 812 aa20.02■□□□□ 0.8
VRK2-205ENST00000432057 PGAM1P18669 254 aa20.02■□□□□ 0.8
VRK2-205ENST00000432057 SMARCB1Q12824 385 aa20.02■□□□□ 0.8
VRK2-205ENST00000432057 IFT88Q13099 833 aa20.02■□□□□ 0.8
VRK2-205ENST00000432057 PSMD5Q16401 504 aa20.02■□□□□ 0.8
VRK2-205ENST00000432057 KCTD11Q693B1 232 aa20.02■□□□□ 0.8
VRK2-205ENST00000432057 MIB1Q86YT6 1006 aa20.02■□□□□ 0.8
VRK2-205ENST00000432057 FBXO22Q8NEZ5 403 aa20.02■□□□□ 0.8
VRK2-205ENST00000432057 OXNAD1Q96HP4 312 aaPredicted RBP20.02■□□□□ 0.8
VRK2-205ENST00000432057 CABS1Q96KC9 395 aa20.02■□□□□ 0.8
VRK2-205ENST00000432057 TOX2Q96NM4 488 aa20.02■□□□□ 0.8
VRK2-205ENST00000432057 CLIC5Q9NZA1 410 aa20.02■□□□□ 0.8
VRK2-205ENST00000432057 SAMD15Q9P1V8 674 aa20.02■□□□□ 0.8
VRK2-205ENST00000432057 ZNF180Q9UJW8 692 aa20.02■□□□□ 0.8
VRK2-205ENST00000432057 TBX21Q9UL17 535 aa20.02■□□□□ 0.8
VRK2-205ENST00000432057 VANGL2Q9ULK5 521 aa20.02■□□□□ 0.8
VRK2-205ENST00000432057 ATXN2Q99700 1313 aaKnown RBP20.02■□□□□ 0.79
VRK2-205ENST00000432057 ZWINTO95229 277 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 SLC2A3P11169 496 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 ATF6P18850 670 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 TAC1P20366 129 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 CCNCP24863 283 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 MLLT6P55198 1093 aaPredicted RBP20.01■□□□□ 0.79
VRK2-205ENST00000432057 C1QTNF8P60827 252 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 ZNF33AQ06730 810 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 BMPR2Q13873 1038 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 C10orf120Q5SQS8 335 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 CNKSR3Q6P9H4 555 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 LVRNQ6Q4G3 990 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 LZTR1Q8N653 840 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 RTL3Q8N8U3 475 aaKnown RBP20.01■□□□□ 0.79
VRK2-205ENST00000432057 CCDC197Q8NCU1 140 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 C2orf15Q8WU43 125 aaKnown RBP20.01■□□□□ 0.79
VRK2-205ENST00000432057 VWCEQ96DN2 955 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 TSGA13Q96PP4 275 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 C12orf65Q9H3J6 166 aaKnown RBP20.01■□□□□ 0.79
VRK2-205ENST00000432057 MOCS1Q9NZB8 636 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 PTPRSQ13332 1948 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 EFEMP2O95967 443 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 HMBSP08397 361 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 ALDH7A1P49419 539 aaKnown RBP20.01■□□□□ 0.79
VRK2-205ENST00000432057 PSEN1P49768 467 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 IKBKEQ14164 716 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 CRYMQ14894 314 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 TRIP4Q15650 581 aaPredicted RBP20.01■□□□□ 0.79
VRK2-205ENST00000432057 MS4A13Q5J8X5 152 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 HHATQ5VTY9 493 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 OTOP3Q7RTS5 596 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 ZNF683Q8IZ20 524 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.01■□□□□ 0.79
VRK2-205ENST00000432057 CNTD1Q8N815 330 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 TCP10LQ8TDR4 215 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 ALKBH8Q96BT7 664 aaKnown RBP20.01■□□□□ 0.79
VRK2-205ENST00000432057 C1orf74Q96LT6 269 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 CRISPLD2Q9H0B8 497 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 OLA1Q9NTK5 396 aaKnown RBP20.01■□□□□ 0.79
VRK2-205ENST00000432057 UBP1Q9NZI7 540 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 MARCH2Q9P0N8 246 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 SLC17A6Q9P2U8 582 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 MTRRQ9UBK8 725 aa20.01■□□□□ 0.79
VRK2-205ENST00000432057 SLC38A8A6NNN8 435 aa20■□□□□ 0.79
VRK2-205ENST00000432057 MAFKO60675 156 aa20■□□□□ 0.79
VRK2-205ENST00000432057 PYGBP11216 843 aa20■□□□□ 0.79
VRK2-205ENST00000432057 RPL10AP62906 217 aaKnown RBP20■□□□□ 0.79
VRK2-205ENST00000432057 USP41Q3LFD5 358 aa20■□□□□ 0.79
VRK2-205ENST00000432057 AFMIDQ63HM1 303 aa20■□□□□ 0.79
VRK2-205ENST00000432057 ZNF419Q96HQ0 510 aaPredicted RBP20■□□□□ 0.79
VRK2-205ENST00000432057 APOPT1Q96IL0 206 aa20■□□□□ 0.79
VRK2-205ENST00000432057 OXCT2Q9BYC2 517 aaPredicted RBP20■□□□□ 0.79
VRK2-205ENST00000432057 CCSER2Q9H7U1 834 aa20■□□□□ 0.79
VRK2-205ENST00000432057 CASS4Q9NQ75 786 aa20■□□□□ 0.79
VRK2-205ENST00000432057 SLC17A7Q9P2U7 560 aa20■□□□□ 0.79
VRK2-205ENST00000432057 MAGED2Q9UNF1 606 aaPredicted RBP20■□□□□ 0.79
VRK2-205ENST00000432057 ANAPC1Q9H1A4 1944 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 SLC12A8A0AV02 714 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 ERI2A8K979 691 aaKnown RBP19.99■□□□□ 0.79
VRK2-205ENST00000432057 KRT37O76014 449 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 ALDH1A2O94788 518 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 KIAA0754O94854 1291 aa19.99■□□□□ 0.79
VRK2-205ENST00000432057 SNRPAP09012 282 aaKnown RBP19.99■□□□□ 0.79
VRK2-205ENST00000432057 CCNB1P14635 433 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms