RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 LETM1O95202 739 aaPredicted RBP9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 LUC7L3O95232 432 aaKnown RBP9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 FGFR1OPO95684 399 aaKnown RBP9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 SEMA4FO95754 770 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CER1O95813 267 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 DNTTP04053 509 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 MATKP42679 507 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 YWHAZP63104 245 aaKnown RBP9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 PDCLQ13371 301 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CDH18Q13634 790 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 HLA-BQ31612 363 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 HNRNPA1L2Q32P51 320 aaKnown RBP9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 TTC31Q49AM3 519 aaPredicted RBP9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 DCAF6Q58WW2 860 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 FSCBQ5H9T9 825 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 DBX2Q6ZNG2 339 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 USP30Q70CQ3 517 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 BAHD1Q8TBE0 780 aaPredicted RBP9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 BIRC7Q96CA5 298 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 MED15Q96RN5 788 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 ORAI3Q9BRQ5 295 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 BTBD1Q9H0C5 482 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 PABPC3Q9H361 631 aaKnown RBP9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 MTG2Q9H4K7 406 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 THAP9Q9H5L6 903 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 GAREM1Q9H706 876 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 POPDC2Q9HBU9 364 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 SGK2Q9HBY8 427 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 TM9SF3Q9HD45 589 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 ACP6Q9NPH0 428 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 SUN2Q9UH99 717 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 RWDD2AQ9UIY3 292 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 PCOLCE2Q9UKZ9 415 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 SCML1Q9UN30 329 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 PCDHGB2Q9Y5G2 931 aa9.74□□□□□ -0.85
CDC42-IT1-201ENST00000431803 A0A1B0GVT2 93 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 GTPBP10A4D1E9 387 aaKnown RBP9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CAPN9O14815 690 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 THAP12O43422 761 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 SIN3BO75182 1162 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 TRUB2O95900 331 aaKnown RBP9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 MOCS2O96007 188 aaPredicted RBP9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 APOEP02649 317 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 IGHV4-34P06331 123 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 FTH1P19P0C7X4 201 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CD27P26842 260 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 GNA15P30679 374 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 RDXP35241 583 aaKnown RBP9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 GRIA4P48058 902 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CSNK1EP49674 416 aaKnown RBP9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 ST8SIA6P61647 398 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 PITX1P78337 314 aaPredicted RBP9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 NR6A1Q15406 480 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 TAF5Q15542 800 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 KIF19Q2TAC6 998 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 ZC3H12AQ5D1E8 599 aaKnown RBP9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 PITRM1Q5JRX3 1037 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 C9orf64Q5T6V5 341 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 GJB7Q6PEY0 223 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 MMS22LQ6ZRQ5 1243 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 IRF2BP1Q8IU81 584 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CFAP52Q8N1V2 620 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CARNMT1Q8N4J0 409 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CHCHD4Q8N4Q1 142 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 ADAMTS14Q8WXS8 1223 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 SHC3Q92529 594 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 SNX19Q92543 992 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 BTN2A3PQ96KV6 586 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 FAM81BQ96LP2 452 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 SLC2A13Q96QE2 648 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 PRMT1Q99873 361 aaKnown RBP9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CRACR2AQ9BSW2 395 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 TM7SF3Q9NS93 570 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 APEX2Q9UBZ4 518 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 TJP2Q9UDY2 1190 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 SERGEFQ9UGK8 458 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 ITIH6Q6UXX5 1313 aa9.73□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CABIN1Q9Y6J0 2220 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 KCNU1A8MYU2 1149 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 FLRT2O43155 660 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 DKK1O94907 266 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CAPNS1P04632 268 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 GLI1P08151 1106 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 SRPRAP08240 638 aaKnown RBP9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 SLC9A1P19634 815 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 TACR2P21452 398 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CTSOP43234 321 aaPredicted RBP9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 ECT2LQ008S8 904 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 APBA1Q02410 837 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 TEAD4Q15561 434 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CST6Q15828 149 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 RAP1GAP2Q684P5 730 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 GBP6Q6ZN66 633 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CHSY1Q86X52 802 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 CCDC117Q8IWD4 279 aaPredicted RBP9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 DHX40Q8IX18 779 aaKnown RBP9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 APCDD1Q8J025 514 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 LGI2Q8N0V4 545 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 WDTC1Q8N5D0 677 aa9.72□□□□□ -0.85
CDC42-IT1-201ENST00000431803 ZCCHC14Q8WYQ9 949 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms