RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 DMC1Q14565 340 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 PLEKHG6Q3KR16 790 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 ATP13A4Q4VNC1 1196 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 PPP6R3Q5H9R7 873 aaPredicted RBP14.79□□□□□ -0.04
CSTF3-202ENST00000431742 PITRM1Q5JRX3 1037 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 RWDD4Q6NW29 188 aaKnown RBP14.79□□□□□ -0.04
CSTF3-202ENST00000431742 ZNF783Q6ZMS7 281 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 RFX8Q6ZV50 586 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 NUDT18Q6ZVK8 323 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 TFAP2DQ7Z6R9 452 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 CCDC117Q8IWD4 279 aaPredicted RBP14.79□□□□□ -0.04
CSTF3-202ENST00000431742 RTL3Q8N8U3 475 aaKnown RBP14.79□□□□□ -0.04
CSTF3-202ENST00000431742 CCDC26Q8TAB7 109 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 KCNV2Q8TDN2 545 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 USP33Q8TEY7 942 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 SHROOM3Q8TF72 1996 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 HSPH1Q92598 858 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 TSGA10Q9BZW7 698 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 PCDH18Q9HCL0 1135 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 NDFIP2Q9NV92 336 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 CWC15Q9P013 229 aaKnown RBP14.79□□□□□ -0.04
CSTF3-202ENST00000431742 PPP2R2CQ9Y2T4 447 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 HYOU1Q9Y4L1 999 aa14.79□□□□□ -0.04
CSTF3-202ENST00000431742 MACROD2A1Z1Q3 448 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 PSTPIP1O43586 416 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 KRT86O43790 486 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 SPOPO43791 374 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 RHOCP08134 193 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 HNRNPLP14866 589 aaKnown RBP eCLIP14.78□□□□□ -0.042e-6■■□□□ 12
CSTF3-202ENST00000431742 MZF1P28698 734 aaPredicted RBP14.78□□□□□ -0.04
CSTF3-202ENST00000431742 GJC1P36383 396 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 MRPS21P82921 87 aaKnown RBP14.78□□□□□ -0.04
CSTF3-202ENST00000431742 C6orf118Q5T5N4 469 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 EGFLAMQ63HQ2 1017 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 MBLAC2Q68D91 279 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 PKN3Q6P5Z2 889 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 MAMSTRQ6ZN01 415 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 DAAM2Q86T65 1068 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 RHOT1Q8IXI2 618 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 PIP4P2Q8N4L2 257 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 RNF10Q8N5U6 811 aaKnown RBP14.78□□□□□ -0.04
CSTF3-202ENST00000431742 TTC17Q96AE7 1141 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 ZNF830Q96NB3 372 aaPredicted RBP14.78□□□□□ -0.04
CSTF3-202ENST00000431742 FEM1AQ9BSK4 669 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 LRFN3Q9BTN0 628 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 CATSPERBQ9H7T0 1116 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 ELOVL2Q9NXB9 296 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 RCOR3Q9P2K3 495 aaPredicted RBP14.78□□□□□ -0.04
CSTF3-202ENST00000431742 CAPN6Q9Y6Q1 641 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 FANCMQ8IYD8 2048 aa14.78□□□□□ -0.04
CSTF3-202ENST00000431742 ILVBLA1L0T0 632 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 H3BRJ5 948 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 TIMM44O43615 452 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 MOCS3O95396 460 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 CD48P09326 243 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 IL4RP24394 825 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 AVPR2P30518 371 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 OR1E1P30953 314 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 CDH6P55285 790 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 SEC13P55735 322 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 ENPP2Q13822 863 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 DPYSL3Q14195 570 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 PDK2Q15119 407 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 IFI16Q16666 785 aaKnown RBP14.77□□□□□ -0.05
CSTF3-202ENST00000431742 HSF5Q4G112 596 aaPredicted RBP14.77□□□□□ -0.05
CSTF3-202ENST00000431742 EMC10Q5UCC4 262 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 RNF219Q5W0B1 726 aaPredicted RBP14.77□□□□□ -0.05
CSTF3-202ENST00000431742 VSIG1Q86XK7 387 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 APCDD1Q8J025 514 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 UMODL1-AS1Q8N2C9 162 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 ZNF513Q8N8E2 541 aaPredicted RBP14.77□□□□□ -0.05
CSTF3-202ENST00000431742 IL17RCQ8NAC3 791 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 RPLP0P6Q8NHW5 317 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 FAF2Q96CS3 445 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 CSPG4P5Q96PW8 444 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 ZNF670Q9BS34 389 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 KLC2Q9H0B6 622 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 NOL6Q9H6R4 1146 aaKnown RBP14.77□□□□□ -0.05
CSTF3-202ENST00000431742 KLHL11Q9NVR0 708 aa14.77□□□□□ -0.05
CSTF3-202ENST00000431742 PLXND1Q9Y4D7 1925 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 A0A0D9SEW6 157 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 C3orf70A6NLC5 250 aaPredicted RBP14.76□□□□□ -0.05
CSTF3-202ENST00000431742 ZNF487B1APH4 448 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 DCLK1O15075 740 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 NPC1O15118 1278 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 ASLP04424 464 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 ERCC2P18074 760 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 ARL4AP40617 200 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 MARCKSL1P49006 195 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 GNA12Q03113 381 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 MTAPQ13126 283 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 KRT81Q14533 505 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 PTPRNQ16849 979 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 C2orf27AQ580R0 203 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 NT5DC3Q86UY8 548 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 SPEM1Q8N4L4 309 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 ALLCQ8N6M5 410 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 DCAF4L2Q8NA75 395 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 KIAA1524Q8TCG1 905 aa14.76□□□□□ -0.05
CSTF3-202ENST00000431742 SORCS1Q8WY21 1168 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms