RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 NPY6RQ99463 290 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 CAAP1Q9H8G2 361 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 ASNSD1Q9NWL6 643 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 TOR4AQ9NXH8 423 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 VANGL2Q9ULK5 521 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 PLA2G4CQ9UP65 541 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 SNX11Q9Y5W9 270 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 A0A1B0GVM2 712 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 TCAF2A6NFQ2 919 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 F5H5T6 163 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 F8VZ95 297 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 H0Y626 953 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 PAGE1O75459 146 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 FSBPO95073 299 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 DNTTP04053 509 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 ASLP04424 464 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 PROS1P07225 676 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 SYPP08247 313 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 CYP11B1P15538 503 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 ECT2LQ008S8 904 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 IL9RQ01113 521 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 SLC6A3Q01959 620 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 AUHQ13825 339 aaKnown RBP12.15□□□□□ -0.46
HDAC4-202ENST00000430200 HLA-BQ31612 363 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 ALFQ53S48 1182 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 KLHDC7AQ5VTJ3 777 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 CDKAL1Q5VV42 579 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 NCEH1Q6PIU2 408 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 C11orf57Q6ZUT1 292 aaPredicted RBP12.15□□□□□ -0.46
HDAC4-202ENST00000430200 BNIPLQ7Z465 357 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 RAB44Q7Z6P3 723 aaPredicted RBP12.15□□□□□ -0.46
HDAC4-202ENST00000430200 XYLT1Q86Y38 959 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 CHCHD4Q8N4Q1 142 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 ZNF397Q8NF99 534 aaPredicted RBP12.15□□□□□ -0.46
HDAC4-202ENST00000430200 EPS8L1Q8TE68 723 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 TBCBQ99426 244 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 PSMB7Q99436 277 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 BTBD1Q9H0C5 482 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 NEUROG2Q9H2A3 272 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 GAREM1Q9H706 876 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 FBRSQ9HAH7 460 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 NOCTQ9UK39 431 aaKnown RBP12.15□□□□□ -0.46
HDAC4-202ENST00000430200 PCOLCE2Q9UKZ9 415 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 SARDHQ9UL12 918 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 IGSF10Q6WRI0 2623 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 LRP4O75096 1905 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 APC2O95996 2303 aa12.15□□□□□ -0.46
HDAC4-202ENST00000430200 FAM47DPA6NHR8 397 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 M0QYT0 321 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 GJB6O95452 261 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 GLI1P08151 1106 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 MMEP08473 750 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 FTH1P19P0C7X4 201 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 UCHL3P15374 230 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 GNSP15586 552 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 ERCC5P28715 1186 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-202ENST00000430200 CCR1P32246 355 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 GALCP54803 685 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 ADPRHP54922 357 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 NOMO3P69849 1222 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 CDK17Q00537 523 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 PTK2Q05397 1052 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 ZBTB16Q05516 673 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 TTC31Q49AM3 519 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-202ENST00000430200 TCP11X2Q5H9J9 407 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 CLEC17AQ6ZS10 378 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 RBM43Q6ZSC3 357 aaKnown RBP12.14□□□□□ -0.47
HDAC4-202ENST00000430200 SLCO6A1Q86UG4 719 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 MARCH9Q86YJ5 346 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 ATP6V0D2Q8N8Y2 350 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 NT5C3BQ969T7 300 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 FAM131CQ96AQ9 280 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 RPRD1AQ96P16 312 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-202ENST00000430200 DDX50Q9BQ39 737 aaKnown RBP12.14□□□□□ -0.47
HDAC4-202ENST00000430200 TRIM62Q9BVG3 475 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 PCED1AQ9H1Q7 454 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 SLC32A1Q9H598 525 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.14□□□□□ -0.47
HDAC4-202ENST00000430200 FBXL12Q9NXK8 326 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 KIAA1522Q9P206 1035 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-202ENST00000430200 ZNF212Q9UDV6 495 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 NEU3Q9UQ49 428 aa12.14□□□□□ -0.47
HDAC4-202ENST00000430200 SMG1Q96Q15 3661 aaKnown RBP12.14□□□□□ -0.47
HDAC4-202ENST00000430200 ADAMTS20P59510 1910 aa12.13□□□□□ -0.47
HDAC4-202ENST00000430200 TRPM6Q9BX84 2022 aa12.13□□□□□ -0.47
HDAC4-202ENST00000430200 EDDM13A0A1B0GTR0 161 aa12.13□□□□□ -0.47
HDAC4-202ENST00000430200 TYW5A2RUC4 315 aaKnown RBP12.13□□□□□ -0.47
HDAC4-202ENST00000430200 H0Y8X5 98 aa12.13□□□□□ -0.47
HDAC4-202ENST00000430200 SNAP91O60641 907 aa12.13□□□□□ -0.47
HDAC4-202ENST00000430200 RNASEH2AO75792 299 aaKnown RBP12.13□□□□□ -0.47
HDAC4-202ENST00000430200 MT-CO1P00395 513 aa12.13□□□□□ -0.47
HDAC4-202ENST00000430200 CAPNS1P04632 268 aa12.13□□□□□ -0.47
HDAC4-202ENST00000430200 CTSLP07711 333 aa12.13□□□□□ -0.47
HDAC4-202ENST00000430200 SRPRAP08240 638 aaKnown RBP12.13□□□□□ -0.47
HDAC4-202ENST00000430200 CHRNB2P17787 502 aa12.13□□□□□ -0.47
HDAC4-202ENST00000430200 GLDCP23378 1020 aa12.13□□□□□ -0.47
HDAC4-202ENST00000430200 CD27P26842 260 aa12.13□□□□□ -0.47
HDAC4-202ENST00000430200 MATKP42679 507 aa12.13□□□□□ -0.47
HDAC4-202ENST00000430200 CTSKP43235 329 aa12.13□□□□□ -0.47
HDAC4-202ENST00000430200 GABRB2P47870 512 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms