RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ADRB1P08588 477 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 DLDP09622 509 aaKnown RBP17.49■□□□□ 0.39
UBE3D-204ENST00000430071 GZMAP12544 262 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 ENGP17813 658 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 POLR2EP19388 210 aaKnown RBP17.49■□□□□ 0.39
UBE3D-204ENST00000430071 CD6P30203 668 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 CSKP41240 450 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 MAPK8P45983 427 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 CDK17Q00537 523 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 C1QBPQ07021 282 aaKnown RBP17.49■□□□□ 0.39
UBE3D-204ENST00000430071 MAPK8IP2Q13387 824 aaPredicted RBP17.49■□□□□ 0.39
UBE3D-204ENST00000430071 UAP1L1Q3KQV9 507 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 EFHC1Q5JVL4 640 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 SLC23A3Q6PIS1 610 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 METTL3Q86U44 580 aaKnown RBP17.49■□□□□ 0.39
UBE3D-204ENST00000430071 ZDHHC17Q8IUH5 632 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 MCOLN2Q8IZK6 566 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 TTC17Q96AE7 1141 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 PANX2Q96RD6 677 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 FAM204AQ9H8W3 233 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 TMEM9BQ9NQ34 198 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 ASNSD1Q9NWL6 643 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 DDIT4Q9NX09 232 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 IMPACTQ9P2X3 320 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 NENFQ9UMX5 172 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 PLA2G4CQ9UP65 541 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 CHD5Q8TDI0 1954 aa17.49■□□□□ 0.39
UBE3D-204ENST00000430071 CACNA1BQ00975 2339 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 SSU72P8A0A1W2PR75 194 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 RTN2O75298 545 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 NDUFS2O75306 463 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 LUC7L3O95232 432 aaKnown RBP17.48■□□□□ 0.39
UBE3D-204ENST00000430071 KCNK5O95279 499 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 APOEP02649 317 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 FTLP02792 175 aaPredicted RBP17.48■□□□□ 0.39
UBE3D-204ENST00000430071 GLI1P08151 1106 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 RNASE9P60153 205 aaKnown RBP17.48■□□□□ 0.39
UBE3D-204ENST00000430071 FAM102AQ5T9C2 384 aaPredicted RBP17.48■□□□□ 0.39
UBE3D-204ENST00000430071 TRNP1Q6NT89 227 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 C14orf80Q86SX3 495 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 VPS36Q86VN1 386 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 OR52K2Q8NGK3 314 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 OR2T3Q8NH03 318 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 PRCCQ92733 491 aaPredicted RBP17.48■□□□□ 0.39
UBE3D-204ENST00000430071 IGSF8Q969P0 613 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 BTN2A3PQ96KV6 586 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 ISCUQ9H1K1 167 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 NHEJ1Q9H9Q4 299 aaPredicted RBP17.48■□□□□ 0.39
UBE3D-204ENST00000430071 CAPN10Q9HC96 672 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 TMPRSS4Q9NRS4 437 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 SNX10Q9Y5X0 201 aa17.48■□□□□ 0.39
UBE3D-204ENST00000430071 FRYQ5TBA9 3013 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 AKAP13Q12802 2813 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 HSF2BPO75031 334 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 DAB1O75553 588 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 GJB6O95452 261 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 CALB1P05937 261 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 FECHP22830 423 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 MZF1P28698 734 aaPredicted RBP17.47■□□□□ 0.39
UBE3D-204ENST00000430071 SCNN1AP37088 669 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 GSCP56915 257 aaPredicted RBP17.47■□□□□ 0.39
UBE3D-204ENST00000430071 RPS14P62263 151 aaKnown RBP17.47■□□□□ 0.39
UBE3D-204ENST00000430071 GFPT1Q06210 699 aaPredicted RBP17.47■□□□□ 0.39
UBE3D-204ENST00000430071 NME3Q13232 169 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 GSE1Q14687 1217 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 DUOXA1Q1HG43 343 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 PITRM1Q5JRX3 1037 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 PSAPL1Q6NUJ1 521 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 FBXL22Q6P050 247 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 RGL4Q8IZJ4 473 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 ATP6V0D2Q8N8Y2 350 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 DDX50Q9BQ39 737 aaKnown RBP17.47■□□□□ 0.39
UBE3D-204ENST00000430071 NUSAP1Q9BXS6 441 aaKnown RBP17.47■□□□□ 0.39
UBE3D-204ENST00000430071 IRX2Q9BZI1 471 aaPredicted RBP17.47■□□□□ 0.39
UBE3D-204ENST00000430071 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.47■□□□□ 0.39
UBE3D-204ENST00000430071 SLCO3A1Q9UIG8 710 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 TMEM59LQ9UK28 342 aa17.47■□□□□ 0.39
UBE3D-204ENST00000430071 TDRD6O60522 2096 aaKnown RBP17.46■□□□□ 0.39
UBE3D-204ENST00000430071 TCRBV5S1A1TA0A578 114 aa17.46■□□□□ 0.39
UBE3D-204ENST00000430071 TTC34A8MYJ7 566 aa17.46■□□□□ 0.39
UBE3D-204ENST00000430071 SIN3BO75182 1162 aa17.46■□□□□ 0.39
UBE3D-204ENST00000430071 RRM1P23921 792 aa17.46■□□□□ 0.39
UBE3D-204ENST00000430071 ACSL1P33121 698 aa17.46■□□□□ 0.39
UBE3D-204ENST00000430071 STK19P49842 368 aaPredicted RBP17.46■□□□□ 0.39
UBE3D-204ENST00000430071 CDH18Q13634 790 aa17.46■□□□□ 0.39
UBE3D-204ENST00000430071 SLC18A3Q16572 532 aa17.46■□□□□ 0.39
UBE3D-204ENST00000430071 RAB6CQ53S08 254 aa17.46■□□□□ 0.39
UBE3D-204ENST00000430071 PPP1R2P3Q6NXS1 205 aa17.46■□□□□ 0.39
UBE3D-204ENST00000430071 ALKBH5Q6P6C2 394 aaKnown RBP17.46■□□□□ 0.39
UBE3D-204ENST00000430071 CCAR2Q8N163 923 aaKnown RBP17.46■□□□□ 0.39
UBE3D-204ENST00000430071 VCPIP1Q96JH7 1222 aa17.46■□□□□ 0.39
UBE3D-204ENST00000430071 RPL10LQ96L21 214 aaKnown RBP17.46■□□□□ 0.39
UBE3D-204ENST00000430071 NPY6RQ99463 290 aa17.46■□□□□ 0.39
UBE3D-204ENST00000430071 TRIM62Q9BVG3 475 aa17.46■□□□□ 0.39
UBE3D-204ENST00000430071 GTPBP2Q9BX10 602 aaKnown RBP17.46■□□□□ 0.39
UBE3D-204ENST00000430071 RAB6CQ9H0N0 254 aa17.46■□□□□ 0.39
UBE3D-204ENST00000430071 METTL5Q9NRN9 209 aaKnown RBP17.46■□□□□ 0.39
UBE3D-204ENST00000430071 PIGVQ9NUD9 493 aa17.46■□□□□ 0.39
UBE3D-204ENST00000430071 SLC6A14Q9UN76 642 aa17.46■□□□□ 0.39
UBE3D-204ENST00000430071 ERVW-1Q9UQF0 538 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms