RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 BCLAF3A2AJT9 711 aaKnown RBP12.88□□□□□ -0.35
CPNE4-201ENST00000429747 MPSTP25325 297 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 PIK3R1P27986 724 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 CD151P48509 253 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 SP2Q02086 613 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 GRIK4Q16099 956 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 CGB2Q6NT52 195 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 GPR141Q7Z602 305 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 PYROXD2Q8N2H3 581 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 SHCBP1Q8NEM2 672 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 NIFKQ9BYG3 293 aaKnown RBP12.88□□□□□ -0.35
CPNE4-201ENST00000429747 PIF1Q9H611 641 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 CATSPERBQ9H7T0 1116 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 PPM1HQ9ULR3 514 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 AK5Q9Y6K8 562 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 MAGEB16A2A368 324 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 MRASO14807 208 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 BNIP3LO60238 219 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 HSPA1AP0DMV8 641 aaKnown RBP12.88□□□□□ -0.35
CPNE4-201ENST00000429747 HSPA1BP0DMV9 641 aaKnown RBP12.88□□□□□ -0.35
CPNE4-201ENST00000429747 ERCC2P18074 760 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 NFKB1P19838 968 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 GEMP55040 296 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 SLC25A11Q02978 314 aaKnown RBP12.88□□□□□ -0.35
CPNE4-201ENST00000429747 NAB1Q13506 487 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 TSTA3Q13630 321 aaPredicted RBP12.88□□□□□ -0.35
CPNE4-201ENST00000429747 PPP1R15BQ5SWA1 713 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 RBM44Q6ZP01 1051 aaKnown RBP12.88□□□□□ -0.35
CPNE4-201ENST00000429747 SLC41A1Q8IVJ1 513 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 PQLC1Q8N2U9 271 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 BLOC1S5Q8TDH9 187 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.88□□□□□ -0.35
CPNE4-201ENST00000429747 VPS50Q96JG6 964 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 NDNQ99608 321 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 DMAP1Q9NPF5 467 aaPredicted RBP12.88□□□□□ -0.35
CPNE4-201ENST00000429747 ZNF358Q9NW07 568 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 GID8Q9NWU2 228 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 MORF4L1Q9UBU8 362 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 COL18A1P39060 1754 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 C15orf38-AP3S2A0A0A6YYH1 394 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 B3GAT3O94766 335 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 F9P00740 461 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 LGALS2P05162 132 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 RGS2P41220 211 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 ACTR3P61158 418 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 CDC42EP1Q00587 391 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 SLC5A9Q2M3M2 681 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 SLC27A1Q6PCB7 646 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 ARPINQ7Z6K5 226 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 SPATA2LQ8IUW3 424 aaPredicted RBP12.88□□□□□ -0.35
CPNE4-201ENST00000429747 LENG8Q96PV6 779 aaPredicted RBP12.88□□□□□ -0.35
CPNE4-201ENST00000429747 PTPRHQ9HD43 1115 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 TBC1D23Q9NUY8 699 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 DDX43Q9NXZ2 648 aaKnown RBP12.88□□□□□ -0.35
CPNE4-201ENST00000429747 ZNF214Q9UL59 606 aaPredicted RBP12.88□□□□□ -0.35
CPNE4-201ENST00000429747 AP4B1Q9Y6B7 739 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 CCDC88AQ3V6T2 1871 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 NCAM2O15394 837 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 MSCO60682 206 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 HOXC6P09630 235 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 PSMA4P25789 261 aaKnown RBP12.88□□□□□ -0.35
CPNE4-201ENST00000429747 HADHAP40939 763 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 CERCAMQ5T4B2 595 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 TLDC1Q6P9B6 456 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 TAS2R42Q7RTR8 314 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 FBXW8Q8N3Y1 598 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 GPRC5AQ8NFJ5 357 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 AZIN2Q96A70 460 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 MIPEPQ99797 713 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 MRGBPQ9NV56 204 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 VTI1BQ9UEU0 232 aa12.88□□□□□ -0.35
CPNE4-201ENST00000429747 GPD2P43304 727 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 RPL5P46777 297 aaKnown RBP12.87□□□□□ -0.35
CPNE4-201ENST00000429747 NPY2RP49146 381 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 TBCELQ5QJ74 424 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 TSHZ1Q6ZSZ6 1077 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 DEFB132Q7Z7B7 95 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 ANKRD13AQ8IZ07 590 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 ZNF483Q8TF39 744 aaPredicted RBP12.87□□□□□ -0.35
CPNE4-201ENST00000429747 WNT8BQ93098 351 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 GFM2Q969S9 779 aaKnown RBP12.87□□□□□ -0.35
CPNE4-201ENST00000429747 RMND5BQ96G75 393 aaPredicted RBP12.87□□□□□ -0.35
CPNE4-201ENST00000429747 FAR2Q96K12 515 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 EGFL8Q99944 293 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 SLC4A5Q9BY07 1137 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 CDH19Q9H159 772 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 POMKQ9H5K3 350 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 STN1Q9H668 368 aaKnown RBP12.87□□□□□ -0.35
CPNE4-201ENST00000429747 CDHR5Q9HBB8 845 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 CROTQ9UKG9 612 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 TEX264Q9Y6I9 313 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 DCAF8L1A6NGE4 600 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 RRN3P2A6NIE6 340 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 TTLL13PA6NNM8 815 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 ITM2AO43736 263 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 MFSD11O43934 449 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 F7P08709 466 aaPredicted RBP12.87□□□□□ -0.35
CPNE4-201ENST00000429747 DLDP09622 509 aaKnown RBP12.87□□□□□ -0.35
CPNE4-201ENST00000429747 USP17L7P0C7H9 530 aa12.87□□□□□ -0.35
CPNE4-201ENST00000429747 NOS2P35228 1153 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms