RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 COL4A5P29400 1685 aa12.76□□□□□ -0.37
CDH3-202ENST00000429102 CCL22O00626 93 aa12.76□□□□□ -0.37
CDH3-202ENST00000429102 FKBP6O75344 327 aa12.76□□□□□ -0.37
CDH3-202ENST00000429102 SERPINB9P50453 376 aa12.76□□□□□ -0.37
CDH3-202ENST00000429102 GRIN3AQ8TCU5 1115 aa12.76□□□□□ -0.37
CDH3-202ENST00000429102 EMID1Q96A84 441 aaPredicted RBP12.76□□□□□ -0.37
CDH3-202ENST00000429102 PHF21BQ96EK2 531 aa12.76□□□□□ -0.37
CDH3-202ENST00000429102 CERS2Q96G23 380 aa12.76□□□□□ -0.37
CDH3-202ENST00000429102 SLC39A3Q9BRY0 314 aa12.76□□□□□ -0.37
CDH3-202ENST00000429102 TRPV6Q9H1D0 765 aa12.76□□□□□ -0.37
CDH3-202ENST00000429102 SNX25Q9H3E2 840 aa12.76□□□□□ -0.37
CDH3-202ENST00000429102 VCX3AQ9NNX9 186 aa12.76□□□□□ -0.37
CDH3-202ENST00000429102 SETD4Q9NVD3 440 aa12.76□□□□□ -0.37
CDH3-202ENST00000429102 LZTS1Q9Y250 596 aa12.76□□□□□ -0.37
CDH3-202ENST00000429102 FNDC3AQ9Y2H6 1198 aaKnown RBP12.76□□□□□ -0.37
CDH3-202ENST00000429102 GSRP00390 522 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 PCSK7Q16549 785 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 LCLAT1Q6UWP7 414 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 FBXW8Q8N3Y1 598 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 KHSRPQ92945 711 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDH3-202ENST00000429102 DCUN1D1Q96GG9 259 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 FZD8Q9H461 694 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 NXF3Q9H4D5 531 aaKnown RBP12.75□□□□□ -0.37
CDH3-202ENST00000429102 LRRC4Q9HBW1 653 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 GMPR2Q9P2T1 348 aaKnown RBP12.75□□□□□ -0.37
CDH3-202ENST00000429102 UBR3Q6ZT12 1888 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 A0A0A0MRY4 1105 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 BCLAF3A2AJT9 711 aaKnown RBP12.75□□□□□ -0.37
CDH3-202ENST00000429102 ABCD1P33897 745 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 GARSP41250 739 aaKnown RBP12.75□□□□□ -0.37
CDH3-202ENST00000429102 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
CDH3-202ENST00000429102 ARL13AQ5H913 290 aaPredicted RBP12.75□□□□□ -0.37
CDH3-202ENST00000429102 ARHGAP22Q7Z5H3 698 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 EGFL6Q8IUX8 553 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 SLC41A1Q8IVJ1 513 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 SPATA22Q8NHS9 363 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 EME1Q96AY2 570 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 SLC45A3Q96JT2 553 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 SPATA13Q96N96 652 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 BFARQ9NZS9 450 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 CCDC167Q9P0B6 97 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 DCDC2Q9UHG0 476 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 RPL26L1Q9UNX3 145 aaKnown RBP12.75□□□□□ -0.37
CDH3-202ENST00000429102 TLL2Q9Y6L7 1015 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 NUP205Q92621 2012 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 EVPLQ92817 2033 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 PIK3R1P27986 724 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 CRABP2P29373 138 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 GRIA4P48058 902 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 MAP3K7CLP57077 242 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 MS4A2Q01362 244 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 LSM12Q3MHD2 195 aaKnown RBP12.75□□□□□ -0.37
CDH3-202ENST00000429102 KYAT3Q6YP21 454 aaKnown RBP12.75□□□□□ -0.37
CDH3-202ENST00000429102 OTOP3Q7RTS5 596 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 DENND6AQ8IWF6 608 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 KLRG1Q96E93 195 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 FRMD8P1Q9BZ68 369 aaPredicted RBP12.75□□□□□ -0.37
CDH3-202ENST00000429102 CDHR5Q9HBB8 845 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 NMRAL1Q9HBL8 299 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 VANGL2Q9ULK5 521 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 ZNF711Q9Y462 761 aa12.75□□□□□ -0.37
CDH3-202ENST00000429102 NRXN2Q9P2S2 1712 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 ADM5C9JUS6 153 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 DFFAO00273 331 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 EEF2KO00418 725 aaKnown RBP12.74□□□□□ -0.37
CDH3-202ENST00000429102 KLF11O14901 512 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 ZBTB24O43167 697 aaPredicted RBP12.74□□□□□ -0.37
CDH3-202ENST00000429102 BEST1O76090 585 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 CYP2C8P10632 490 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 CACNB2Q08289 660 aaPredicted RBP12.74□□□□□ -0.37
CDH3-202ENST00000429102 ITGA7Q13683 1181 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 CELF3Q5SZQ8 465 aaKnown RBP12.74□□□□□ -0.37
CDH3-202ENST00000429102 SLC9A4Q6AI14 798 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 GK5Q6ZS86 529 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 IFNEQ86WN2 208 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 DSELQ8IZU8 1212 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 IPMKQ8NFU5 416 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 MIPOL1Q8TD10 442 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 RNF139Q8WU17 664 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 NAT14Q8WUY8 206 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 FAM167AQ96KS9 214 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 RPL10LQ96L21 214 aaKnown RBP12.74□□□□□ -0.37
CDH3-202ENST00000429102 FTHL17Q9BXU8 183 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 MRPL1Q9BYD6 325 aaKnown RBP12.74□□□□□ -0.37
CDH3-202ENST00000429102 PIF1Q9H611 641 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.74□□□□□ -0.37
CDH3-202ENST00000429102 ZNF180Q9UJW8 692 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 TNFSF13BQ9Y275 285 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 SNX13Q9Y5W8 968 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 AP4B1Q9Y6B7 739 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 KIAA1217Q5T5P2 1943 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 TRIP11Q15643 1979 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 IL18RAPO95256 599 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 AOC1P19801 751 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 GP5P40197 560 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 CHN2P52757 468 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 USP46P62068 366 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 TUBB3Q13509 450 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 MAP7Q14244 749 aa12.74□□□□□ -0.37
CDH3-202ENST00000429102 TAZQ16635 292 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms