RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 FAM149B1Q96BN6 582 aa16.09■□□□□ 0.17
GHDC-203ENST00000428494 MFSD3Q96ES6 412 aa16.09■□□□□ 0.17
GHDC-203ENST00000428494 HAPLN3Q96S86 360 aa16.09■□□□□ 0.17
GHDC-203ENST00000428494 CDRT15Q96T59 188 aa16.09■□□□□ 0.17
GHDC-203ENST00000428494 APOL2Q9BQE5 337 aa16.09■□□□□ 0.17
GHDC-203ENST00000428494 TCF7L2Q9NQB0 619 aa16.09■□□□□ 0.17
GHDC-203ENST00000428494 SNTG2Q9NY99 539 aa16.09■□□□□ 0.17
GHDC-203ENST00000428494 GJD2Q9UKL4 321 aa16.09■□□□□ 0.17
GHDC-203ENST00000428494 CDY2AQ9Y6F7 541 aa16.09■□□□□ 0.17
GHDC-203ENST00000428494 CDY1Q9Y6F8 540 aa16.09■□□□□ 0.17
GHDC-203ENST00000428494 CASQ2O14958 399 aaPredicted RBP16.08■□□□□ 0.17
GHDC-203ENST00000428494 USP2O75604 605 aaPredicted RBP16.08■□□□□ 0.17
GHDC-203ENST00000428494 FBXO21O94952 628 aa16.08■□□□□ 0.17
GHDC-203ENST00000428494 LSAMPQ13449 338 aa16.08■□□□□ 0.17
GHDC-203ENST00000428494 SH3D19Q5HYK7 790 aa16.08■□□□□ 0.17
GHDC-203ENST00000428494 TMEM198Q66K66 360 aa16.08■□□□□ 0.17
GHDC-203ENST00000428494 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.08■□□□□ 0.17
GHDC-203ENST00000428494 USP13Q92995 863 aaPredicted RBP16.08■□□□□ 0.17
GHDC-203ENST00000428494 MARK4Q96L34 752 aa16.08■□□□□ 0.17
GHDC-203ENST00000428494 RBBP8Q99708 897 aa16.08■□□□□ 0.17
GHDC-203ENST00000428494 CPNE1Q99829 537 aa16.08■□□□□ 0.17
GHDC-203ENST00000428494 RTKNQ9BST9 563 aa16.08■□□□□ 0.17
GHDC-203ENST00000428494 CCDC28BQ9BUN5 200 aa16.08■□□□□ 0.17
GHDC-203ENST00000428494 GATA5Q9BWX5 397 aaPredicted RBP16.08■□□□□ 0.17
GHDC-203ENST00000428494 NFKBIZQ9BYH8 718 aa16.08■□□□□ 0.17
GHDC-203ENST00000428494 FZD10Q9ULW2 581 aa16.08■□□□□ 0.17
GHDC-203ENST00000428494 STX16-NPEPL1H3BU86 382 aa16.08■□□□□ 0.16
GHDC-203ENST00000428494 PMLP29590 882 aa16.08■□□□□ 0.16
GHDC-203ENST00000428494 THOP1P52888 689 aa16.08■□□□□ 0.16
GHDC-203ENST00000428494 IFRD2Q12894 506 aaPredicted RBP16.08■□□□□ 0.16
GHDC-203ENST00000428494 DYNC1I2Q13409 638 aaKnown RBP16.08■□□□□ 0.16
GHDC-203ENST00000428494 SNAPC2Q13487 334 aa16.08■□□□□ 0.16
GHDC-203ENST00000428494 DCAF6Q58WW2 860 aa16.08■□□□□ 0.16
GHDC-203ENST00000428494 FSCBQ5H9T9 825 aa16.08■□□□□ 0.16
GHDC-203ENST00000428494 GRTP1Q5TC63 336 aa16.08■□□□□ 0.16
GHDC-203ENST00000428494 OGFRL1Q5TC84 451 aaPredicted RBP16.08■□□□□ 0.16
GHDC-203ENST00000428494 PAOXQ6QHF9 649 aa16.08■□□□□ 0.16
GHDC-203ENST00000428494 SPATA24Q86W54 205 aa16.08■□□□□ 0.16
GHDC-203ENST00000428494 PQLC1Q8N2U9 271 aa16.08■□□□□ 0.16
GHDC-203ENST00000428494 DCUN1D1Q96GG9 259 aa16.08■□□□□ 0.16
GHDC-203ENST00000428494 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.08■□□□□ 0.16
GHDC-203ENST00000428494 ERAP1Q9NZ08 941 aa16.08■□□□□ 0.16
GHDC-203ENST00000428494 PPP1R1BQ9UD71 204 aaPredicted RBP16.08■□□□□ 0.16
GHDC-203ENST00000428494 GTF2IRD1Q9UHL9 959 aa16.08■□□□□ 0.16
GHDC-203ENST00000428494 AK5Q9Y6K8 562 aa16.08■□□□□ 0.16
GHDC-203ENST00000428494 SSC5DA1L4H1 1573 aa16.08■□□□□ 0.16
GHDC-203ENST00000428494 POLR2AP24928 1970 aaKnown RBP16.07■□□□□ 0.16
GHDC-203ENST00000428494 ATP9BO43861 1147 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 DNAJA2O60884 412 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 C2P06681 752 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 ZNF286BP0CG31 522 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 SMIM18P0DKX4 95 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 PIM1P11309 404 aaPredicted RBP16.07■□□□□ 0.16
GHDC-203ENST00000428494 TPH1P17752 444 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 XRCC1P18887 633 aaPredicted RBP16.07■□□□□ 0.16
GHDC-203ENST00000428494 GLDCP23378 1020 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 PIK3R1P27986 724 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 SULT1E1P49888 294 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 MS4A2Q01362 244 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 TMEM62Q0P6H9 643 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 PPP2R5DQ14738 602 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 CCDC153Q494R4 210 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 DALRD3Q5D0E6 543 aaKnown RBP16.07■□□□□ 0.16
GHDC-203ENST00000428494 CERCAMQ5T4B2 595 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 MAP3K21Q5TCX8 1036 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 DSELQ8IZU8 1212 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 RNF139Q8WU17 664 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 PPP1R13LQ8WUF5 828 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 KCNK16Q96T55 309 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 MAF1Q9H063 256 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 VCX3AQ9NNX9 186 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 COMMD3-BMI1R4GMX3 469 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 LOC285556D6RIA3 1793 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 HACD1B0YJ81 288 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 TK2O00142 265 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 JUNP05412 331 aaKnown RBP16.07■□□□□ 0.16
GHDC-203ENST00000428494 SETSIPP0DME0 302 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 GARSP41250 739 aaKnown RBP16.07■□□□□ 0.16
GHDC-203ENST00000428494 GLRBP48167 497 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 RABGGTBP53611 331 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 NME3Q13232 169 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 LSM12Q3MHD2 195 aaKnown RBP16.07■□□□□ 0.16
GHDC-203ENST00000428494 SMYD5Q6GMV2 418 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 DNAAF3Q8N9W5 541 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 URGCPQ8TCY9 931 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 SLC2A14Q8TDB8 520 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 NUF2Q9BZD4 464 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 FAM96AQ9H5X1 160 aa16.07■□□□□ 0.16
GHDC-203ENST00000428494 COPS7BQ9H9Q2 264 aaPredicted RBP16.07■□□□□ 0.16
GHDC-203ENST00000428494 FAM72CH0Y354 149 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 TRIM13O60858 407 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 CNMDO75829 334 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 TOMM70O94826 608 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 STAU1O95793 577 aaKnown RBP16.06■□□□□ 0.16
GHDC-203ENST00000428494 SPRP35270 261 aaPredicted RBP16.06■□□□□ 0.16
GHDC-203ENST00000428494 SERPINB8P50452 374 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 LIMK2P53671 638 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 XIAPP98170 497 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 EML3Q32P44 896 aa16.06■□□□□ 0.16
GHDC-203ENST00000428494 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms