RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 RNF148Q8N7C7 305 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 S100ZQ8WXG8 99 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 SLC7A3Q8WY07 619 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 SLCO4A1Q96BD0 722 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 FAF2Q96CS3 445 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 ZNF486Q96H40 463 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-206ENST00000428313 TCF12Q99081 682 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 ADI1Q9BV57 179 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 CDCA7Q9BWT1 371 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-206ENST00000428313 RAD21L1Q9H4I0 556 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 ZNF385DQ9H6B1 395 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 COPG2Q9UBF2 871 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 TMA7Q9Y2S6 64 aaKnown RBP16.42■□□□□ 0.22
C9orf3-206ENST00000428313 IGLV3-22A0A075B6J6 115 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 TCRBV5S1A1TA0A578 114 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 PAPSS1O43252 624 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-206ENST00000428313 NUAK1O60285 661 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 CALB1P05937 261 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 C7P10643 843 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 ZNF76P36508 570 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 GRIA3P42263 894 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 ATXN3P54252 364 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-206ENST00000428313 MLLT10P55197 1068 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 EIF6P56537 245 aaKnown RBP16.42■□□□□ 0.22
C9orf3-206ENST00000428313 PTK2BQ14289 1009 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 SIGIRRQ6IA17 410 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 UNC5AQ6ZN44 842 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 KCTD1Q719H9 257 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 CCDC60Q8IWA6 550 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-206ENST00000428313 SNX31Q8N9S9 440 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 ABHD11Q8NFV4 315 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-206ENST00000428313 FNIP1Q8TF40 1166 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 TXNDC15Q96J42 360 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 MFSD14AQ96MC6 490 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 OR52B2Q96RD2 323 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 YME1L1Q96TA2 773 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 PCDHGC3Q9UN70 934 aa16.42■□□□□ 0.22
C9orf3-206ENST00000428313 GOLGA8CPA6NN73 597 aa16.41■□□□□ 0.22
C9orf3-206ENST00000428313 PSMD11O00231 422 aa16.41■□□□□ 0.22
C9orf3-206ENST00000428313 SEC14L2O76054 403 aa16.41■□□□□ 0.22
C9orf3-206ENST00000428313 MMP8P22894 467 aa16.41■□□□□ 0.22
C9orf3-206ENST00000428313 KRT6CP48668 564 aa16.41■□□□□ 0.22
C9orf3-206ENST00000428313 PRKCQQ04759 706 aa16.41■□□□□ 0.22
C9orf3-206ENST00000428313 SLC36A3Q495N2 470 aa16.41■□□□□ 0.22
C9orf3-206ENST00000428313 PPP6R3Q5H9R7 873 aaPredicted RBP16.41■□□□□ 0.22
C9orf3-206ENST00000428313 BTBD8Q5XKL5 378 aa16.41■□□□□ 0.22
C9orf3-206ENST00000428313 SLC9A4Q6AI14 798 aa16.41■□□□□ 0.22
C9orf3-206ENST00000428313 ABRAXAS1Q6UWZ7 409 aa16.41■□□□□ 0.22
C9orf3-206ENST00000428313 CAMK1DQ8IU85 385 aa16.41■□□□□ 0.22
C9orf3-206ENST00000428313 ZSCAN18Q8TBC5 510 aaPredicted RBP16.41■□□□□ 0.22
C9orf3-206ENST00000428313 ZC3H15Q8WU90 426 aaKnown RBP16.41■□□□□ 0.22
C9orf3-206ENST00000428313 PBXIP1Q96AQ6 731 aa16.41■□□□□ 0.22
C9orf3-206ENST00000428313 ACO2Q99798 780 aaKnown RBP16.41■□□□□ 0.22
C9orf3-206ENST00000428313 NOL11Q9H8H0 719 aaKnown RBP16.41■□□□□ 0.22
C9orf3-206ENST00000428313 AKIP1Q9NQ31 210 aa16.41■□□□□ 0.22
C9orf3-206ENST00000428313 TOPORSQ9NS56 1045 aaPredicted RBP16.41■□□□□ 0.22
C9orf3-206ENST00000428313 CNOT6Q9ULM6 557 aaKnown RBP16.41■□□□□ 0.22
C9orf3-206ENST00000428313 SOCS2O14508 198 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 UFL1O94874 794 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 PRKCGP05129 697 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 UGT2B4P06133 528 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 CFHP08603 1231 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 KRT7P08729 469 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 GNAO1P09471 354 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 HK2P52789 917 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 OGDHQ02218 1023 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 MERTKQ12866 999 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 PERM1Q5SV97 790 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 DPP8Q6V1X1 898 aaPredicted RBP16.4■□□□□ 0.22
C9orf3-206ENST00000428313 PLEKHG7Q6ZR37 379 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 CYP2W1Q8TAV3 490 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 CAPSLQ8WWF8 208 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 POMGNT1Q8WZA1 660 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 FAR2Q96K12 515 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 MCEEQ96PE7 176 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 C8orf4Q9NR00 106 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 GDAP2Q9NXN4 497 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 SATB2Q9UPW6 733 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 ITM2BQ9Y287 266 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 SLC15A5A6NIM6 579 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 STX16-NPEPL1H3BU86 382 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 DLGAP1O14490 977 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 CHMP2AO43633 222 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 HSPA4LO95757 839 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 CD1EP15812 388 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 MX2P20592 715 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 MAGEA6P43360 314 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 QARSP47897 775 aaKnown RBP16.4■□□□□ 0.22
C9orf3-206ENST00000428313 HLCSP50747 726 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 KCNQ4P56696 695 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 RPS8P62241 208 aaKnown RBP16.4■□□□□ 0.22
C9orf3-206ENST00000428313 ROR1Q01973 937 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 ERFEQ4G0M1 354 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 FAAH2Q6GMR7 532 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 DNAJC24Q6P3W2 148 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 PADI6Q6TGC4 694 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 CYS1Q717R9 158 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 C14orf80Q86SX3 495 aa16.4■□□□□ 0.22
C9orf3-206ENST00000428313 ZNF781Q8N8C0 355 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms