RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 NKRFO15226 690 aaKnown RBP eCLIP13.4□□□□□ -0.26
SPG11-202ENST00000427534 PDK2Q15119 407 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 SEL1L3Q68CR1 1132 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 LRRC74BQ6ZQY2 392 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 CNPY3Q9BT09 278 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 TMEM120AQ9BXJ8 343 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 CDHR5Q9HBB8 845 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 PCDH12Q9NPG4 1184 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 ST3GAL5Q9UNP4 418 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 ENO4A6NNW6 628 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 ISM1B1AKI9 464 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 SSTR1P30872 391 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 KCNMA1Q12791 1236 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 LRRC73Q5JTD7 316 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 N4BP2L1Q5TBK1 243 aaPredicted RBP13.4□□□□□ -0.26
SPG11-202ENST00000427534 RGMBQ6NW40 437 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 CCDC103Q8IW40 242 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 TNIP2Q8NFZ5 429 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 PPP1R2P1Q96PQ5 205 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 ELL3Q9HB65 397 aaPredicted RBP13.4□□□□□ -0.26
SPG11-202ENST00000427534 NFASCO94856 1347 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 ZBTB22O15209 634 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 FBXO21O94952 628 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 ZCCHC18P0CG32 403 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 MMP13P45452 471 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 TRAF7Q6Q0C0 670 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 TLE6Q9H808 572 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 MTO1Q9Y2Z2 717 aaKnown RBP13.4□□□□□ -0.26
SPG11-202ENST00000427534 TRIM66O15016 1216 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 KPNA6O60684 536 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 KLHL18O94889 574 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 LRATO95237 230 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 EIF2B5Q13144 721 aaKnown RBP13.4□□□□□ -0.26
SPG11-202ENST00000427534 ITGA9Q13797 1035 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 CRY1Q16526 586 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 NFE2Q16621 373 aaPredicted RBP13.4□□□□□ -0.26
SPG11-202ENST00000427534 APOBEC3HQ6NTF7 200 aaKnown RBP13.4□□□□□ -0.26
SPG11-202ENST00000427534 LRRC8BQ6P9F7 803 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 SRLQ86TD4 932 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 C4orf19Q8IY42 314 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 ZNF606Q8WXB4 792 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 PMEPA1Q969W9 287 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 SKA1Q96BD8 255 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 ADI1Q9BV57 179 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 MPP6Q9NZW5 540 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 ANGPT4Q9Y264 503 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 GLRA3O75311 464 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 F9P00740 461 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 ATP5BP06576 529 aaKnown RBP13.4□□□□□ -0.26
SPG11-202ENST00000427534 MAT2AP31153 395 aaKnown RBP13.4□□□□□ -0.26
SPG11-202ENST00000427534 CRATP43155 626 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 SERPINB10P48595 397 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 MTDHQ86UE4 582 aaKnown RBP13.4□□□□□ -0.26
SPG11-202ENST00000427534 CYP4Z1Q86W10 505 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 FAM129CQ86XR2 697 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 KCNK16Q96T55 309 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 HIPK3Q9H422 1215 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 BRD9Q9H8M2 597 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 TBC1D13Q9NVG8 400 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 PACSIN3Q9UKS6 424 aa13.4□□□□□ -0.26
SPG11-202ENST00000427534 OR10H2O60403 315 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 GABRR2P28476 465 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 SARSP49591 514 aaKnown RBP13.39□□□□□ -0.27
SPG11-202ENST00000427534 CYP4F2P78329 520 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 SEMG2Q02383 582 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 ST3GAL1Q11201 340 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 RAPSNQ13702 412 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 SPIDRQ14159 915 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 CELF3Q5SZQ8 465 aaKnown RBP13.39□□□□□ -0.27
SPG11-202ENST00000427534 RETSATQ6NUM9 610 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 HDHD2Q9H0R4 259 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 SLC28A3Q9HAS3 691 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 ARHGEF3Q9NR81 526 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 CYP2A6P11509 494 aaPredicted RBP13.39□□□□□ -0.27
SPG11-202ENST00000427534 PSMD8P48556 350 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 IRAK1P51617 712 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 TGM3Q08188 693 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 GPAT3Q53EU6 434 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 DACT2Q5SW24 774 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 FBXO39Q8N4B4 442 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 POU5F2Q8N7G0 328 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 KAT5Q92993 513 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 RAD21L1Q9H4I0 556 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 DPP7Q9UHL4 492 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 VPS9D1Q9Y2B5 631 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 CES2O00748 559 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 PRLRP16471 622 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 PTPN3P26045 913 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 ATP5C1P36542 298 aaKnown RBP13.39□□□□□ -0.27
SPG11-202ENST00000427534 RCN1Q15293 331 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 DNAL1Q4LDG9 190 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 NOMO2Q5JPE7 1267 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 ANKS1BQ7Z6G8 1248 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 ZC3H7AQ8IWR0 971 aaKnown RBP13.39□□□□□ -0.27
SPG11-202ENST00000427534 CD302Q8IX05 232 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 MROH7Q68CQ1 1323 aa13.39□□□□□ -0.27
SPG11-202ENST00000427534 ZSCAN5CA6NGD5 496 aaPredicted RBP13.39□□□□□ -0.27
SPG11-202ENST00000427534 MSI1O43347 362 aaKnown RBP13.39□□□□□ -0.27
SPG11-202ENST00000427534 PTPN1P18031 435 aaKnown RBP13.39□□□□□ -0.27
SPG11-202ENST00000427534 LBPP18428 481 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms