RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 CBWD2Q8IUF1 395 aa9.52□□□□□ -0.89
LSG1-202ENST00000427461 GPD1LQ8N335 351 aa9.52□□□□□ -0.89
LSG1-202ENST00000427461 KCTD17Q8N5Z5 321 aa9.52□□□□□ -0.89
LSG1-202ENST00000427461 C12orf29Q8N999 325 aa9.52□□□□□ -0.89
LSG1-202ENST00000427461 TMEM145Q8NBT3 493 aa9.52□□□□□ -0.89
LSG1-202ENST00000427461 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.52□□□□□ -0.89
LSG1-202ENST00000427461 ZNF548Q8NEK5 533 aaPredicted RBP9.52□□□□□ -0.89
LSG1-202ENST00000427461 TPCN2Q8NHX9 752 aa9.52□□□□□ -0.89
LSG1-202ENST00000427461 TMA16Q96EY4 203 aaKnown RBP9.52□□□□□ -0.89
LSG1-202ENST00000427461 C8orf76Q96K31 380 aa9.52□□□□□ -0.89
LSG1-202ENST00000427461 PPP1R13BQ96KQ4 1090 aa9.52□□□□□ -0.89
LSG1-202ENST00000427461 CCDC3Q9BQI4 270 aa9.52□□□□□ -0.89
LSG1-202ENST00000427461 SDCBP2Q9H190 292 aa9.52□□□□□ -0.89
LSG1-202ENST00000427461 FAM49BQ9NUQ9 324 aa9.52□□□□□ -0.89
LSG1-202ENST00000427461 INTS6Q9UL03 887 aaKnown RBP9.52□□□□□ -0.89
LSG1-202ENST00000427461 TPX2Q9ULW0 747 aaKnown RBP9.52□□□□□ -0.89
LSG1-202ENST00000427461 KIF3AQ9Y496 699 aa9.52□□□□□ -0.89
LSG1-202ENST00000427461 UBE4BO95155 1302 aa9.52□□□□□ -0.89
LSG1-202ENST00000427461 NTN3O00634 580 aaPredicted RBP9.51□□□□□ -0.89
LSG1-202ENST00000427461 PLRG1O43660 514 aaKnown RBP9.51□□□□□ -0.89
LSG1-202ENST00000427461 REC8O95072 547 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 JMJD7P0C870 316 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 RALAP11233 206 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 VAV1P15498 845 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 NR1D1P20393 614 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 MZF1P28698 734 aaPredicted RBP9.51□□□□□ -0.89
LSG1-202ENST00000427461 CSKP41240 450 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 CLCN6P51797 869 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 MYL6P60660 151 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 NR0B2Q15466 257 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 SETMARQ53H47 684 aaPredicted RBP9.51□□□□□ -0.89
LSG1-202ENST00000427461 L1TD1Q5T7N2 865 aaKnown RBP9.51□□□□□ -0.89
LSG1-202ENST00000427461 OR6B2Q6IFH4 312 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 SCARA5Q6ZMJ2 495 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 CLEC20AQ6ZU45 233 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 MAMDC2Q7Z304 686 aaPredicted RBP9.51□□□□□ -0.89
LSG1-202ENST00000427461 ZC3H18Q86VM9 953 aaKnown RBP9.51□□□□□ -0.89
LSG1-202ENST00000427461 TRIM69Q86WT6 500 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 HVCN1Q96D96 273 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 ABHD17AQ96GS6 310 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 ACCSQ96QU6 501 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 FGFBP2Q9BYJ0 223 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 XYLT2Q9H1B5 865 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 MRPL44Q9H9J2 332 aaKnown RBP9.51□□□□□ -0.89
LSG1-202ENST00000427461 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.51□□□□□ -0.89
LSG1-202ENST00000427461 MARCH2Q9P0N8 246 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 HMGXB4Q9UGU5 601 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 SLCO3A1Q9UIG8 710 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 KLF15Q9UIH9 416 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 DAAM1Q9Y4D1 1078 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 PCDHB11Q9Y5F2 797 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 CSMD2Q7Z408 3487 aa9.51□□□□□ -0.89
LSG1-202ENST00000427461 PDZD2O15018 2839 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 A0A087X0B3 334 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 TARSL2A2RTX5 802 aaKnown RBP9.5□□□□□ -0.89
LSG1-202ENST00000427461 PRR19A6NJB7 356 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 C9orf172C9J069 976 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 VPS4BO75351 444 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 GCNT3O95395 438 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 ADH1BP00325 375 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 DLATP10515 647 aaKnown RBP9.5□□□□□ -0.89
LSG1-202ENST00000427461 NUMBP49757 651 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 KIF11P52732 1056 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 IRX6P78412 446 aaPredicted RBP9.5□□□□□ -0.89
LSG1-202ENST00000427461 EIF3IQ13347 325 aaKnown RBP9.5□□□□□ -0.89
LSG1-202ENST00000427461 MMS22LQ6ZRQ5 1243 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 TADA2BQ86TJ2 420 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 WDR49Q8IV35 697 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 SLC35F3Q8IY50 421 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 SYCP3Q8IZU3 236 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 ZNF276Q8N554 614 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 RAD54LQ92698 747 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 PTPRN2Q92932 1015 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 USP7Q93009 1102 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 TTC17Q96AE7 1141 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 FAM131CQ96AQ9 280 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 TNIP3Q96KP6 325 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 LMLNQ96KR4 655 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 RPL10LQ96L21 214 aaKnown RBP9.5□□□□□ -0.89
LSG1-202ENST00000427461 RABGEF1Q9UJ41 708 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 SALL4Q9UJQ4 1053 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 SARDHQ9UL12 918 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 VPS4AQ9UN37 437 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 EXOC7Q9UPT5 735 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 ERVW-1Q9UQF0 538 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 LOXL2Q9Y4K0 774 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 PCDHA5Q9Y5H7 936 aa9.5□□□□□ -0.89
LSG1-202ENST00000427461 EDDM13A0A1B0GTR0 161 aa9.49□□□□□ -0.89
LSG1-202ENST00000427461 GOLGA6L7A0A1B0GV03 622 aa9.49□□□□□ -0.89
LSG1-202ENST00000427461 ZNF233A6NK53 670 aa9.49□□□□□ -0.89
LSG1-202ENST00000427461 K7EM74 188 aa9.49□□□□□ -0.89
LSG1-202ENST00000427461 TBL1XO60907 577 aa9.49□□□□□ -0.89
LSG1-202ENST00000427461 RNGTTO60942 597 aaKnown RBP9.49□□□□□ -0.89
LSG1-202ENST00000427461 FAM200BP0CF97 657 aa9.49□□□□□ -0.89
LSG1-202ENST00000427461 PRF1P14222 555 aa9.49□□□□□ -0.89
LSG1-202ENST00000427461 TNNI1P19237 187 aa9.49□□□□□ -0.89
LSG1-202ENST00000427461 NUDT1P36639 197 aa9.49□□□□□ -0.89
LSG1-202ENST00000427461 MAPK10P53779 464 aa9.49□□□□□ -0.89
LSG1-202ENST00000427461 TAS2R38P59533 333 aa9.49□□□□□ -0.89
LSG1-202ENST00000427461 HNRNPKP61978 463 aaKnown RBP eCLIP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms