RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ERCC4Q92889 916 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SMARCE1Q969G3 411 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 RPL10LQ96L21 214 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 LGMNQ99538 433 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SRRTQ9BXP5 876 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 MTG2Q9H4K7 406 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 POPDC2Q9HBU9 364 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 TMEM51Q9NW97 253 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SLCO3A1Q9UIG8 710 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SLCO1B1Q9Y6L6 691 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ADAMTS20P59510 1910 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 CACNA1EQ15878 2313 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ITIH6Q6UXX5 1313 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 MYH10P35580 1976 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 A0A1W2PR77 199 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 RIOK3O14730 519 aaKnown RBP12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ALOX15BO15296 676 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 PMM2O15305 246 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 FGFR1OPO95684 399 aaKnown RBP12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 KRT5P13647 590 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 TACR2P21452 398 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ACP1P24666 158 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 MZF1P28698 734 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 CCR1P32246 355 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 RECQLP46063 649 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 FMO5P49326 533 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ACADVLP49748 655 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SGSHP51688 502 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ADPRHP54922 357 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 YWHAZP63104 245 aaKnown RBP12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 BNIP3Q12983 259 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ZNF211Q13398 564 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 PKDCCQ504Y2 493 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 COBLL1Q53SF7 1204 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 EFHC1Q5JVL4 640 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 RAP1GAP2Q684P5 730 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ANKRD40Q6AI12 368 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 NEK5Q6P3R8 708 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 FBXL19Q6PCT2 694 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 DCP2Q8IU60 420 aaKnown RBP12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ZNF248Q8NDW4 579 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 WFDC5Q8TCV5 224 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 DQX1Q8TE96 717 aaKnown RBP12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 STK32AQ8WU08 396 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 PTPRN2Q92932 1015 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 MRGPRX3Q96LB0 322 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 CEP63Q96MT8 703 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 NOX5Q96PH1 765 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 FAM129BQ96TA1 746 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 THAP9Q9H5L6 903 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 NAALADL1Q9UQQ1 740 aa12.65□□□□□ -0.38
HLA-DQB3-203ENST00000425319 A0A1B0GVM2 712 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 BICDL2A1A5D9 508 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 TCAF2A6NFQ2 919 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 KCNU1A8MYU2 1149 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 GNA14O95837 355 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 MT-CO3P00414 261 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 WNT1P04628 370 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 BRD2P25440 801 aaKnown RBP12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 ITPKBP27987 946 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 AKT2P31751 481 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 PLK1P53350 603 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 ZC3H12AQ5D1E8 599 aaKnown RBP12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 FSCBQ5H9T9 825 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 NADSYN1Q6IA69 706 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 TRIM69Q86WT6 500 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 ZC3H3Q8IXZ2 948 aaKnown RBP12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 SNIP1Q8TAD8 396 aaKnown RBP12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 TSC1Q92574 1164 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 CCDC97Q96F63 343 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 MYO19Q96H55 970 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 SLC39A13Q96H72 371 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 DHTKD1Q96HY7 919 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 FCRL2Q96LA5 508 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 ZNF578Q96N58 590 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 RPRD1AQ96P16 312 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 DEPDC7Q96QD5 511 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 ORAI3Q9BRQ5 295 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 DUSP23Q9BVJ7 150 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 NUCKS1Q9H1E3 243 aaKnown RBP12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 PRORYQ9H606 182 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 USP29Q9HBJ7 922 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 PREBQ9HCU5 417 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 NCKIPSDQ9NZQ3 722 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 IPO11Q9UI26 975 aaKnown RBP12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 CYTH4Q9UIA0 394 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 INTS6Q9UL03 887 aaKnown RBP12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 PAXBP1Q9Y5B6 917 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 IGF2RP11717 2491 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 ZFHX4Q86UP3 3567 aa12.64□□□□□ -0.39
HLA-DQB3-203ENST00000425319 LAMA1P25391 3075 aa12.63□□□□□ -0.39
HLA-DQB3-203ENST00000425319 MCF2LO15068 1137 aa12.63□□□□□ -0.39
HLA-DQB3-203ENST00000425319 LATO43561 262 aa12.63□□□□□ -0.39
HLA-DQB3-203ENST00000425319 PLRG1O43660 514 aaKnown RBP12.63□□□□□ -0.39
HLA-DQB3-203ENST00000425319 BNIP3LO60238 219 aa12.63□□□□□ -0.39
HLA-DQB3-203ENST00000425319 TRUB2O95900 331 aaKnown RBP12.63□□□□□ -0.39
HLA-DQB3-203ENST00000425319 PDGFRAP16234 1089 aa12.63□□□□□ -0.39
HLA-DQB3-203ENST00000425319 MAT2AP31153 395 aaKnown RBP12.63□□□□□ -0.39
HLA-DQB3-203ENST00000425319 CTSOP43234 321 aaPredicted RBP12.63□□□□□ -0.39
HLA-DQB3-203ENST00000425319 VASPP50552 380 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms