RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 RPL10LQ96L21 214 aaKnown RBP17.07■□□□□ 0.32
SHANK2-207ENST00000425049 OMDQ99983 421 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 NAT10Q9H0A0 1025 aaKnown RBP17.07■□□□□ 0.32
SHANK2-207ENST00000425049 C6orf106Q9H6K1 298 aaPredicted RBP17.07■□□□□ 0.32
SHANK2-207ENST00000425049 FBXL12Q9NXK8 326 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 VPS28Q9UK41 221 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 FAM47DPA6NHR8 397 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 LGALS16A8MUM7 142 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 GIPC1O14908 333 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 MZF1P28698 734 aaPredicted RBP17.06■□□□□ 0.32
SHANK2-207ENST00000425049 PMLP29590 882 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 PSMD8P48556 350 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 CXCR3P49682 368 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 NUMBP49757 651 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 STK19P49842 368 aaPredicted RBP17.06■□□□□ 0.32
SHANK2-207ENST00000425049 CDH4P55283 916 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 CDR2Q01850 454 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 UBXN1Q04323 297 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 ELAVL3Q14576 367 aaKnown RBP17.06■□□□□ 0.32
SHANK2-207ENST00000425049 TEAD4Q15561 434 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 C2CD6Q53TS8 623 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 C9orf64Q5T6V5 341 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 ACBD5Q5T8D3 534 aaPredicted RBP17.06■□□□□ 0.32
SHANK2-207ENST00000425049 CXorf57Q6NSI4 855 aaKnown RBP17.06■□□□□ 0.32
SHANK2-207ENST00000425049 IL27RAQ6UWB1 636 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 DSG4Q86SJ6 1040 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 MMAAQ8IVH4 418 aaKnown RBP17.06■□□□□ 0.32
SHANK2-207ENST00000425049 OR2I1PQ8NGU4 316 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 SLC20A1Q8WUM9 679 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 PGAP3Q96FM1 320 aaPredicted RBP17.06■□□□□ 0.32
SHANK2-207ENST00000425049 CNTNAP3BQ96NU0 1288 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 TBCBQ99426 244 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 CNTNAP3Q9BZ76 1288 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 MUC3BQ9H195 1237 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 ARHGEF38Q9NXL2 777 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 SLCO3A1Q9UIG8 710 aa17.06■□□□□ 0.32
SHANK2-207ENST00000425049 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.06■□□□□ 0.32
SHANK2-207ENST00000425049 A0A1W2PP55 124 aa17.05■□□□□ 0.32
SHANK2-207ENST00000425049 UPK3BL1B0FP48 263 aa17.05■□□□□ 0.32
SHANK2-207ENST00000425049 UPK3BL2E5RIL1 263 aa17.05■□□□□ 0.32
SHANK2-207ENST00000425049 MID1O15344 667 aa17.05■□□□□ 0.32
SHANK2-207ENST00000425049 RNASEH2AO75792 299 aaKnown RBP17.05■□□□□ 0.32
SHANK2-207ENST00000425049 ADCY5O95622 1261 aa17.05■□□□□ 0.32
SHANK2-207ENST00000425049 CER1O95813 267 aa17.05■□□□□ 0.32
SHANK2-207ENST00000425049 ADH1BP00325 375 aa17.05■□□□□ 0.32
SHANK2-207ENST00000425049 RHOCP08134 193 aa17.05■□□□□ 0.32
SHANK2-207ENST00000425049 C7P10643 843 aa17.05■□□□□ 0.32
SHANK2-207ENST00000425049 ZNF18P17022 549 aa17.05■□□□□ 0.32
SHANK2-207ENST00000425049 RDXP35241 583 aaKnown RBP17.05■□□□□ 0.32
SHANK2-207ENST00000425049 AFF3P51826 1226 aaKnown RBP17.05■□□□□ 0.32
SHANK2-207ENST00000425049 PLK1P53350 603 aa17.05■□□□□ 0.32
SHANK2-207ENST00000425049 SEMA3BQ13214 749 aa17.05■□□□□ 0.32
SHANK2-207ENST00000425049 ACCSLQ4AC99 568 aa17.05■□□□□ 0.32
SHANK2-207ENST00000425049 OTUD1Q5VV17 481 aaPredicted RBP17.05■□□□□ 0.32
SHANK2-207ENST00000425049 METTL5Q9NRN9 209 aaKnown RBP17.05■□□□□ 0.32
SHANK2-207ENST00000425049 DNAAF2Q9NVR5 837 aaKnown RBP17.05■□□□□ 0.32
SHANK2-207ENST00000425049 LIMA1Q9UHB6 759 aaKnown RBP17.05■□□□□ 0.32
SHANK2-207ENST00000425049 NOCTQ9UK39 431 aaKnown RBP17.05■□□□□ 0.32
SHANK2-207ENST00000425049 TPRP12270 2363 aaKnown RBP17.04■□□□□ 0.32
SHANK2-207ENST00000425049 LRRC72A6NJI9 287 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 IL1BP01584 269 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 TFE3P19532 575 aaPredicted RBP17.04■□□□□ 0.32
SHANK2-207ENST00000425049 SLC8A1P32418 973 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 FLT3P36888 993 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 NSFP46459 744 aaKnown RBP17.04■□□□□ 0.32
SHANK2-207ENST00000425049 IRAK1P51617 712 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 JAM2P57087 298 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 KRT83P78385 493 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 FOXC1Q12948 553 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 SLC14A1Q13336 389 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 HNRNPDQ14103 355 aaKnown RBP17.04■□□□□ 0.32
SHANK2-207ENST00000425049 ADAT2Q7Z6V5 191 aaKnown RBP17.04■□□□□ 0.32
SHANK2-207ENST00000425049 C14orf80Q86SX3 495 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 STK40Q8N2I9 435 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 NT5C3BQ969T7 300 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 CFAP57Q96MR6 1250 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 C11orf70Q9BRQ4 267 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 FEM1AQ9BSK4 669 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 SEPT11Q9NVA2 429 aaKnown RBP17.04■□□□□ 0.32
SHANK2-207ENST00000425049 FZD4Q9ULV1 537 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 SIK3Q9Y2K2 1263 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 PCDH15Q96QU1 1955 aa17.04■□□□□ 0.32
SHANK2-207ENST00000425049 ACACBO00763 2458 aa17.03■□□□□ 0.32
SHANK2-207ENST00000425049 ASCC3Q8N3C0 2202 aaKnown RBP17.03■□□□□ 0.32
SHANK2-207ENST00000425049 EPHB6O15197 1021 aa17.03■□□□□ 0.32
SHANK2-207ENST00000425049 C5AR1P21730 350 aa17.03■□□□□ 0.32
SHANK2-207ENST00000425049 CD27P26842 260 aa17.03■□□□□ 0.32
SHANK2-207ENST00000425049 SDC4P31431 198 aa17.03■□□□□ 0.32
SHANK2-207ENST00000425049 SHC2P98077 582 aa17.03■□□□□ 0.32
SHANK2-207ENST00000425049 FMO1Q01740 532 aa17.03■□□□□ 0.32
SHANK2-207ENST00000425049 TYRO3Q06418 890 aa17.03■□□□□ 0.32
SHANK2-207ENST00000425049 C6orf118Q5T5N4 469 aa17.03■□□□□ 0.32
SHANK2-207ENST00000425049 KIAA0895LQ68EN5 471 aa17.03■□□□□ 0.32
SHANK2-207ENST00000425049 ARCQ7LC44 396 aa17.03■□□□□ 0.32
SHANK2-207ENST00000425049 AOPEPQ8N6M6 819 aa17.03■□□□□ 0.32
SHANK2-207ENST00000425049 OR8D1Q8WZ84 308 aa17.03■□□□□ 0.32
SHANK2-207ENST00000425049 BIRC7Q96CA5 298 aa17.03■□□□□ 0.32
SHANK2-207ENST00000425049 CCDC114Q96M63 670 aa17.03■□□□□ 0.32
SHANK2-207ENST00000425049 C2orf49Q9BVC5 232 aaPredicted RBP17.03■□□□□ 0.32
SHANK2-207ENST00000425049 PCDHB9Q9Y5E1 797 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms