RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 ETS1P14921 441 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 CALRP27797 417 aaKnown RBP15.41■□□□□ 0.06
CALD1-206ENST00000424922 NR2C2P49116 596 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 MLLT6P55198 1093 aaPredicted RBP15.41■□□□□ 0.06
CALD1-206ENST00000424922 EP400NLQ6ZTU2 488 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 GAREM2Q75VX8 874 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 PCGF5Q86SE9 256 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 TMC8Q8IU68 726 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 OTUD6BQ8N6M0 293 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 GLIS1Q8NBF1 620 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 ARHGEF2Q92974 986 aaKnown RBP15.41■□□□□ 0.06
CALD1-206ENST00000424922 BTN2A3PQ96KV6 586 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 CYP2S1Q96SQ9 504 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 RBM15Q96T37 977 aaKnown RBP eCLIP15.41■□□□□ 0.06
CALD1-206ENST00000424922 CORO1BQ9BR76 489 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 LRRC3Q9BY71 257 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 SLC28A3Q9HAS3 691 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 PRDM16Q9HAZ2 1276 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 DTLQ9NZJ0 730 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 ACTL7BQ9Y614 415 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 MFSD11O43934 449 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 CDH16O75309 829 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 IFNB1P01574 187 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 GDF10P55107 478 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 QPCTQ16769 361 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 MS4A13Q5J8X5 152 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 RNASEH2BQ5TBB1 312 aaKnown RBP15.41■□□□□ 0.06
CALD1-206ENST00000424922 GKAP1Q5VSY0 366 aaPredicted RBP15.41■□□□□ 0.06
CALD1-206ENST00000424922 TXNDC8Q6A555 127 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 CPLX4Q7Z7G2 160 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 ADGRD2Q7Z7M1 963 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 C14orf80Q86SX3 495 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 UNC45BQ8IWX7 931 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 CACNA2D3Q8IZS8 1091 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 GDPD5Q8WTR4 605 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 RSAD2Q8WXG1 361 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 SEC16BQ96JE7 1060 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 C1orf74Q96LT6 269 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 GKN1Q9NS71 199 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 HCFC1R1Q9NWW0 138 aa15.41■□□□□ 0.06
CALD1-206ENST00000424922 HELZP42694 1942 aaKnown RBP15.4■□□□□ 0.06
CALD1-206ENST00000424922 E9PAM4 449 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 ZSCAN5DPP0CG00 497 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 CYP4F8P98187 520 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 GPS1Q13098 491 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 PAFAH1B3Q15102 231 aaKnown RBP15.4■□□□□ 0.06
CALD1-206ENST00000424922 MANEALQ5VSG8 457 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 NUGGCQ68CJ6 796 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 TDRPQ86YL5 185 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 FAM71DQ8N9W8 422 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 SLC22A12Q96S37 553 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 PPCSQ9HAB8 311 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 ASAH2Q9NR71 780 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 EURLQ9NYK6 297 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 VANGL2Q9ULK5 521 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 NEU3Q9UQ49 428 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 EPOPA6NHQ4 379 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 ANKRD65E5RJM6 399 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 SMAPO00193 183 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 MYL4P12829 197 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 COG7P83436 770 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 TBC1D31Q96DN5 1066 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 PWWP2AQ96N64 755 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 ATXN3LQ9H3M9 355 aa15.4■□□□□ 0.06
CALD1-206ENST00000424922 DNAJC17Q9NVM6 304 aaKnown RBP15.4■□□□□ 0.06
CALD1-206ENST00000424922 A0A1W2PRU2 124 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 ALOX15BO15296 676 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 FSBPO95073 299 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 C1RP00736 705 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 MBL2P11226 248 aaPredicted RBP15.39■□□□□ 0.05
CALD1-206ENST00000424922 GJA1P17302 382 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 HARS2P49590 506 aaKnown RBP15.39■□□□□ 0.05
CALD1-206ENST00000424922 NRG1Q02297 640 aaPredicted RBP15.39■□□□□ 0.05
CALD1-206ENST00000424922 NR1H3Q13133 447 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 RASA2Q15283 850 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 FAM182AQ5T1J6 154 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 ARTNQ5T4W7 220 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 ZNF697Q5TEC3 545 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 RAP1GAP2Q684P5 730 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 BZW1Q7L1Q6 419 aaKnown RBP15.39■□□□□ 0.05
CALD1-206ENST00000424922 RTL10Q7L3V2 364 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 TP53INP2Q8IXH6 220 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 NPWQ8N729 165 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 ARL14EPQ8N8R7 260 aaPredicted RBP15.39■□□□□ 0.05
CALD1-206ENST00000424922 MRPS31Q92665 395 aaKnown RBP15.39■□□□□ 0.05
CALD1-206ENST00000424922 OLFM3Q96PB7 478 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 SMPD4Q9NXE4 827 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 MPP6Q9NZW5 540 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 HCFC2Q9Y5Z7 792 aa15.39■□□□□ 0.05
CALD1-206ENST00000424922 NYNRINQ9P2P1 1898 aaKnown RBP15.39■□□□□ 0.05
CALD1-206ENST00000424922 GOLGA6L7A0A1B0GV03 622 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 NRG2O14511 850 aaPredicted RBP15.38■□□□□ 0.05
CALD1-206ENST00000424922 STC2O76061 302 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 IRF1P10914 325 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 HDCP19113 662 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 RBL1P28749 1068 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 HOXC13P31276 330 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 HTR7P34969 479 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 NRLP54845 237 aa15.38■□□□□ 0.05
CALD1-206ENST00000424922 XRCC4Q13426 336 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms