RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 RASSF8Q8NHQ8 419 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 TNFRSF25Q93038 417 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 HAPLN3Q96S86 360 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 CDK5RAP1Q96SZ6 601 aaKnown RBP6.57□□□□□ -1.36
SDCBP-203ENST00000424270 AGXT2Q9BYV1 514 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 CPEB1Q9BZB8 566 aaKnown RBP6.57□□□□□ -1.36
SDCBP-203ENST00000424270 UNKQ9C0B0 810 aaKnown RBP6.57□□□□□ -1.36
SDCBP-203ENST00000424270 PARVGQ9HBI0 331 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 FZD3Q9NPG1 666 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 TMEM30AQ9NV96 361 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 KCND2Q9NZV8 630 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 AGO1Q9UL18 857 aaKnown RBP6.57□□□□□ -1.36
SDCBP-203ENST00000424270 PADI4Q9UM07 663 aa6.57□□□□□ -1.36
SDCBP-203ENST00000424270 EDDM13A0A1B0GTR0 161 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 D6RAR5 112 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 LATO43561 262 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 RNGTTO60942 597 aaKnown RBP6.56□□□□□ -1.36
SDCBP-203ENST00000424270 NADKO95544 446 aaPredicted RBP6.56□□□□□ -1.36
SDCBP-203ENST00000424270 KLKB1P03952 638 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 ANXA6P08133 673 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 GIMD1P0DJR0 217 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 PRF1P14222 555 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 ZNF18P17022 549 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 NNMTP40261 264 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 PDX1P52945 283 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 EVCP57679 992 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 CLDN2P57739 230 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 TOB2Q14106 344 aaPredicted RBP6.56□□□□□ -1.36
SDCBP-203ENST00000424270 HNRNPA1L2Q32P51 320 aaKnown RBP6.56□□□□□ -1.36
SDCBP-203ENST00000424270 WDR72Q3MJ13 1102 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 DCAF6Q58WW2 860 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 OR6B2Q6IFH4 312 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 RUFY3Q7L099 469 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 TMPRSS9Q7Z410 1059 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 KCNK18Q7Z418 384 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 ADIPOR2Q86V24 386 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 GPBP1Q86WP2 473 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 BRSK2Q8IWQ3 736 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 SYCP3Q8IZU3 236 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 MMP21Q8N119 569 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 STK40Q8N2I9 435 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 SDR16C5Q8N3Y7 309 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 SYT2Q8N9I0 419 aaPredicted RBP6.56□□□□□ -1.36
SDCBP-203ENST00000424270 TTC13Q8NBP0 860 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 RBBP8NLQ8NC74 664 aaPredicted RBP6.56□□□□□ -1.36
SDCBP-203ENST00000424270 GPBAR1Q8TDU6 330 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 PTPRN2Q92932 1015 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 TMEM159Q96B96 161 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 TMA16Q96EY4 203 aaKnown RBP6.56□□□□□ -1.36
SDCBP-203ENST00000424270 TNIP3Q96KP6 325 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 REEP2Q9BRK0 252 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 CAAP1Q9H8G2 361 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 GPN2Q9H9Y4 310 aaPredicted RBP6.56□□□□□ -1.36
SDCBP-203ENST00000424270 PDE11AQ9HCR9 933 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 SIRPGQ9P1W8 387 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 STIM2Q9P246 746 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 SIX4Q9UIU6 781 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 SALL4Q9UJQ4 1053 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 ODF2LQ9ULJ1 636 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 NOL7Q9UMY1 257 aaKnown RBP6.56□□□□□ -1.36
SDCBP-203ENST00000424270 EXOC7Q9UPT5 735 aa6.56□□□□□ -1.36
SDCBP-203ENST00000424270 NBASA2RRP1 2371 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 CKAP5Q14008 2032 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 TARSL2A2RTX5 802 aaKnown RBP6.55□□□□□ -1.36
SDCBP-203ENST00000424270 TYW5A2RUC4 315 aaKnown RBP6.55□□□□□ -1.36
SDCBP-203ENST00000424270 A6NNZ2 444 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 TTC34A8MYJ7 566 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 CASC3O15234 703 aaKnown RBP6.55□□□□□ -1.36
SDCBP-203ENST00000424270 CAPN5O15484 640 aaPredicted RBP6.55□□□□□ -1.36
SDCBP-203ENST00000424270 NKX2-8O15522 239 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 BNIP3LO60238 219 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 MOCS3O95396 460 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 LDHAP00338 332 aaKnown RBP6.55□□□□□ -1.36
SDCBP-203ENST00000424270 ASLP04424 464 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 CCDC130P13994 396 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 DRD2P14416 443 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 JUNDP17535 347 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 PDCP20941 246 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 HOXD9P28356 352 aaPredicted RBP6.55□□□□□ -1.36
SDCBP-203ENST00000424270 ADORA2BP29275 332 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 CD70P32970 193 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 ADKP55263 362 aaKnown RBP6.55□□□□□ -1.36
SDCBP-203ENST00000424270 CCL7P80098 99 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 POU5F1Q01860 360 aaKnown RBP6.55□□□□□ -1.36
SDCBP-203ENST00000424270 GUCY1B3Q02153 619 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 PDE4CQ08493 712 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 CDC20Q12834 499 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 MRPL49Q13405 166 aaKnown RBP6.55□□□□□ -1.36
SDCBP-203ENST00000424270 ORC2Q13416 577 aaPredicted RBP6.55□□□□□ -1.36
SDCBP-203ENST00000424270 TRPC3Q13507 836 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 ELOAQ14241 798 aaKnown RBP6.55□□□□□ -1.36
SDCBP-203ENST00000424270 FAM46CQ5VWP2 391 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 SCARA3Q6AZY7 606 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 KLHDC10Q6PID8 442 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 CRELD2Q6UXH1 353 aaPredicted RBP6.55□□□□□ -1.36
SDCBP-203ENST00000424270 DTHD1Q6ZMT9 781 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 Q6ZSR6 202 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 KDELC2Q7Z4H8 507 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 PARGQ86W56 976 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 TRIM69Q86WT6 500 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms