RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 C5AR1P21730 350 aa16.67■□□□□ 0.26
COL18A1-205ENST00000423214 USP8P40818 1118 aa16.67■□□□□ 0.26
COL18A1-205ENST00000423214 NUMBP49757 651 aa16.67■□□□□ 0.26
COL18A1-205ENST00000423214 SLC12A1Q13621 1099 aa16.67■□□□□ 0.26
COL18A1-205ENST00000423214 ELAVL3Q14576 367 aaKnown RBP16.67■□□□□ 0.26
COL18A1-205ENST00000423214 CIR1Q86X95 450 aaPredicted RBP16.67■□□□□ 0.26
COL18A1-205ENST00000423214 STK40Q8N2I9 435 aa16.67■□□□□ 0.26
COL18A1-205ENST00000423214 OR14C36Q8NHC7 312 aa16.67■□□□□ 0.26
COL18A1-205ENST00000423214 ZNF606Q8WXB4 792 aa16.67■□□□□ 0.26
COL18A1-205ENST00000423214 ORAI3Q9BRQ5 295 aa16.67■□□□□ 0.26
COL18A1-205ENST00000423214 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.67■□□□□ 0.26
COL18A1-205ENST00000423214 DDIT4Q9NX09 232 aa16.67■□□□□ 0.26
COL18A1-205ENST00000423214 COX16Q9P0S2 106 aa16.67■□□□□ 0.26
COL18A1-205ENST00000423214 CYTH4Q9UIA0 394 aa16.67■□□□□ 0.26
COL18A1-205ENST00000423214 TPX2Q9ULW0 747 aaKnown RBP16.67■□□□□ 0.26
COL18A1-205ENST00000423214 LAMA5O15230 3695 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 KCNU1A8MYU2 1149 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 IL1BP01584 269 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 IGLV3-25P01717 112 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 CAPNS1P04632 268 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 PDGFRAP16234 1089 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 MZF1P28698 734 aaPredicted RBP16.66■□□□□ 0.26
COL18A1-205ENST00000423214 CD38P28907 300 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 CCR5P51681 352 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 ADPRHP54922 357 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 OXCT1P55809 520 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 CDK17Q00537 523 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 SULT2A1Q06520 285 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 ARHGAP44Q17R89 818 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 SLC45A4Q5BKX6 768 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 KCNT1Q5JUK3 1230 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 TRIM65Q6PJ69 517 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 TMEM110Q86TL2 294 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 CREBRFQ8IUR6 639 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 CCAR2Q8N163 923 aaKnown RBP16.66■□□□□ 0.26
COL18A1-205ENST00000423214 AADATQ8N5Z0 425 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 ELF4Q99607 663 aaPredicted RBP16.66■□□□□ 0.26
COL18A1-205ENST00000423214 CRACR2AQ9BSW2 395 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 GDF3Q9NR23 364 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 SLCO3A1Q9UIG8 710 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 SLC25A13Q9UJS0 675 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 KNTC1P50748 2209 aa16.66■□□□□ 0.26
COL18A1-205ENST00000423214 URB1O60287 2271 aaKnown RBP16.65■□□□□ 0.26
COL18A1-205ENST00000423214 A0A1B0GTQ1 180 aa16.65■□□□□ 0.26
COL18A1-205ENST00000423214 YKT6O15498 198 aa16.65■□□□□ 0.26
COL18A1-205ENST00000423214 DKK1O94907 266 aa16.65■□□□□ 0.26
COL18A1-205ENST00000423214 GOT1P17174 413 aa16.65■□□□□ 0.26
COL18A1-205ENST00000423214 CCR1P32246 355 aa16.65■□□□□ 0.26
COL18A1-205ENST00000423214 PITX1P78337 314 aaPredicted RBP16.65■□□□□ 0.26
COL18A1-205ENST00000423214 GJB7Q6PEY0 223 aa16.65■□□□□ 0.26
COL18A1-205ENST00000423214 DSG4Q86SJ6 1040 aa16.65■□□□□ 0.26
COL18A1-205ENST00000423214 PASD1Q8IV76 773 aa16.65■□□□□ 0.26
COL18A1-205ENST00000423214 OR8D1Q8WZ84 308 aa16.65■□□□□ 0.26
COL18A1-205ENST00000423214 PTPRN2Q92932 1015 aa16.65■□□□□ 0.26
COL18A1-205ENST00000423214 SERAC1Q96JX3 654 aa16.65■□□□□ 0.26
COL18A1-205ENST00000423214 RPRD1AQ96P16 312 aaPredicted RBP16.65■□□□□ 0.26
COL18A1-205ENST00000423214 NOX5Q96PH1 765 aa16.65■□□□□ 0.26
COL18A1-205ENST00000423214 SPAG5Q96R06 1193 aa16.65■□□□□ 0.26
COL18A1-205ENST00000423214 FAM129BQ96TA1 746 aa16.65■□□□□ 0.26
COL18A1-205ENST00000423214 ACP6Q9NPH0 428 aa16.65■□□□□ 0.26
COL18A1-205ENST00000423214 GPSM3Q9Y4H4 160 aa16.65■□□□□ 0.26
COL18A1-205ENST00000423214 CELSR3Q9NYQ7 3312 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 ARID1BQ8NFD5 2236 aaPredicted RBP16.64■□□□□ 0.25
COL18A1-205ENST00000423214 HSF2BPO75031 334 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 ITGAVP06756 1048 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 GLI1P08151 1106 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 CENPCQ03188 943 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 MTA1Q13330 715 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 TAF5Q15542 800 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 CAMK4Q16566 473 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 EFHC1Q5JVL4 640 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 C19orf48Q6RUI8 117 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 GBP6Q6ZN66 633 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 GATAD2AQ86YP4 633 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 DEFB106AQ8N104 65 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 PPP1R9BQ96SB3 815 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 CPXM1Q96SM3 734 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 ASNSD1Q9NWL6 643 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 APEX2Q9UBZ4 518 aa16.64■□□□□ 0.25
COL18A1-205ENST00000423214 TBC1D3DA0A087WVF3 549 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 TBC1D3IA0A087WXS9 549 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 TBC1D3EA0A087X179 549 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 TBC1D3KA0A087X1G2 549 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 TBC1D3FA6NER0 549 aaPredicted RBP16.63■□□□□ 0.25
COL18A1-205ENST00000423214 TBC1D3LB9A6J9 549 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 ENC1O14682 589 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 GRAP2O75791 330 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 WNT1P04628 370 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 TBC1D3HP0C7X1 549 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 HOXB3P14651 431 aaPredicted RBP16.63■□□□□ 0.25
COL18A1-205ENST00000423214 VAV1P15498 845 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 ARRB1P49407 418 aaPredicted RBP16.63■□□□□ 0.25
COL18A1-205ENST00000423214 SNX16P57768 344 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 NME3Q13232 169 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 COL9A2Q14055 689 aaPredicted RBP16.63■□□□□ 0.25
COL18A1-205ENST00000423214 KCNJ12Q14500 433 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 COL28A1Q2UY09 1125 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 ACCSLQ4AC99 568 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 FAM46CQ5VWP2 391 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 TBC1D3GQ6DHY5 549 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms