RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 VAPBO95292 243 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 ALDOAP04075 364 aaKnown RBP13.48□□□□□ -0.25
CALD1-205ENST00000422748 SERPINB9P50453 376 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 SCNN1DP51172 638 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 ROR1Q01973 937 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 SLC25A11Q02978 314 aaKnown RBP13.48□□□□□ -0.25
CALD1-205ENST00000422748 ART3Q13508 389 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 TIGD2Q4W5G0 525 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 FAM47CQ5HY64 1035 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 WDR44Q5JSH3 913 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 SLFN13Q68D06 897 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 KCNT2Q6UVM3 1135 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 ZBTB49Q6ZSB9 765 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 TRMT1LQ7Z2T5 733 aaKnown RBP13.48□□□□□ -0.25
CALD1-205ENST00000422748 NLGN1Q8N2Q7 840 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 VPS37AQ8NEZ2 397 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 PCDHAC1Q9H158 963 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 C20orf96Q9NUD7 363 aaPredicted RBP13.48□□□□□ -0.25
CALD1-205ENST00000422748 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.48□□□□□ -0.254e-6■■□□□ 11.4
CALD1-205ENST00000422748 COPG2Q9UBF2 871 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 RABL2AQ9UBK7 228 aaPredicted RBP13.48□□□□□ -0.25
CALD1-205ENST00000422748 IPO11Q9UI26 975 aaKnown RBP13.48□□□□□ -0.25
CALD1-205ENST00000422748 SERPINB13Q9UIV8 391 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 ST14Q9Y5Y6 855 aa13.48□□□□□ -0.25
CALD1-205ENST00000422748 WDR64B1ANS9 1081 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 APOC4-APOC2K7ER74 178 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 APOC2P02655 101 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 ARP10275 920 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 NR4A1P22736 598 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 MAP4P27816 1152 aaKnown RBP13.47□□□□□ -0.25
CALD1-205ENST00000422748 SNRPFP62306 86 aaKnown RBP13.47□□□□□ -0.25
CALD1-205ENST00000422748 MRPS9P82933 396 aaKnown RBP13.47□□□□□ -0.25
CALD1-205ENST00000422748 NDUFA5Q16718 116 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 SHROOM1Q2M3G4 852 aaPredicted RBP13.47□□□□□ -0.25
CALD1-205ENST00000422748 PERM1Q5SV97 790 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 LDLRAP1Q5SW96 308 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 ZNF618Q5T7W0 954 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 ZNF354CQ86Y25 554 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 MCF2L2Q86YR7 1114 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 HERC6Q8IVU3 1022 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 MPP5Q8N3R9 675 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 TMCO5AQ8N6Q1 288 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 TERB1Q8NA31 727 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 SLCO4A1Q96BD0 722 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 ZNF641Q96N77 438 aaPredicted RBP13.47□□□□□ -0.25
CALD1-205ENST00000422748 ZNF577Q9BSK1 485 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 OSBPL10Q9BXB5 764 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 CEP44Q9C0F1 390 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 PARVBQ9HBI1 364 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 CDY2AQ9Y6F7 541 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 CDY1Q9Y6F8 540 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 PSME4Q14997 1843 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 E2F8A0AVK6 867 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 TMEM150BA6NC51 233 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 HSPA4LO95757 839 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 TTKP33981 857 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 HSD17B4P51659 736 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 UNC5BQ8IZJ1 945 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 ARFGAP1Q8N6T3 406 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.47□□□□□ -0.25
CALD1-205ENST00000422748 TNIP2Q8NFZ5 429 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 C1orf50Q9BV19 199 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 DDX4Q9NQI0 724 aaKnown RBP13.47□□□□□ -0.25
CALD1-205ENST00000422748 SMOXQ9NWM0 555 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 TMEM216Q9P0N5 145 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 PCDHB12Q9Y5F1 795 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 SMCHD1A6NHR9 2005 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 C9IYK1 514 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 TRIM38O00635 465 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 NOL3O60936 208 aaKnown RBP13.47□□□□□ -0.25
CALD1-205ENST00000422748 HLA-DRAP01903 254 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 EIF2S1P05198 315 aaKnown RBP13.47□□□□□ -0.25
CALD1-205ENST00000422748 CCNA2P20248 432 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 ADORA2AP29274 412 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 IDUAP35475 653 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 GNL1P36915 607 aaPredicted RBP13.47□□□□□ -0.25
CALD1-205ENST00000422748 IKQ13123 557 aaPredicted RBP13.47□□□□□ -0.25
CALD1-205ENST00000422748 NEDD8Q15843 81 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 FAM209AQ5JX71 171 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 CYP4A22Q5TCH4 519 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 KCTD8Q6ZWB6 473 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 CHSY3Q70JA7 882 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 THNSL1Q8IYQ7 743 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 OTUD5Q96G74 571 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 CNDP1Q96KN2 507 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 NPAS2Q99743 824 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 NANOGQ9H9S0 305 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 ZNF358Q9NW07 568 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 RBAKQ9NYW8 714 aaPredicted RBP13.47□□□□□ -0.25
CALD1-205ENST00000422748 ADA2Q9NZK5 511 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 NXF1Q9UBU9 619 aaKnown RBP13.47□□□□□ -0.25
CALD1-205ENST00000422748 TBX20Q9UMR3 447 aa13.47□□□□□ -0.25
CALD1-205ENST00000422748 TRIM64A6NGJ6 449 aa13.46□□□□□ -0.25
CALD1-205ENST00000422748 A6NL46 340 aa13.46□□□□□ -0.25
CALD1-205ENST00000422748 LRCH4O75427 683 aa13.46□□□□□ -0.25
CALD1-205ENST00000422748 MYO1DO94832 1006 aa13.46□□□□□ -0.25
CALD1-205ENST00000422748 BCL10O95999 233 aa13.46□□□□□ -0.25
CALD1-205ENST00000422748 APRTP07741 180 aa13.46□□□□□ -0.25
CALD1-205ENST00000422748 PSMA2P25787 234 aa13.46□□□□□ -0.25
CALD1-205ENST00000422748 TCF7P36402 384 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms