RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 KLHL5Q96PQ7 755 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 CYLDQ9NQC7 956 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 FAM105AQ9NUU6 356 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 TMLHEQ9NVH6 421 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 SHROOM3Q8TF72 1996 aa13.66□□□□□ -0.22
MCF2L-213ENST00000421756 CDH23Q9H251 3354 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 GLTPD2A6NH11 291 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 TBX10O75333 385 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 TBX18O95935 607 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 SETSIPP0DME0 302 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 RALBP11234 206 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 ZFXP17010 805 aaPredicted RBP13.65□□□□□ -0.22
MCF2L-213ENST00000421756 PTPN3P26045 913 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 ARRB2P32121 409 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 USP10Q14694 798 aaKnown RBP13.65□□□□□ -0.22
MCF2L-213ENST00000421756 OTUD1Q5VV17 481 aaPredicted RBP13.65□□□□□ -0.22
MCF2L-213ENST00000421756 FSTL4Q6MZW2 842 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 MCUQ8NE86 351 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 SHCBP1Q8NEM2 672 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 PHACTR1Q9C0D0 580 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 CHST12Q9NRB3 414 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 CNTN3Q9P232 1028 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 HBS1LQ9Y450 684 aaKnown RBP13.65□□□□□ -0.22
MCF2L-213ENST00000421756 BPTFQ12830 3046 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 NEMP2A6NFY4 417 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 ARL5CA6NH57 179 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 XPO1O14980 1071 aaKnown RBP13.65□□□□□ -0.22
MCF2L-213ENST00000421756 F2P00734 622 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 EPHA3P29320 983 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 PTPN9P43378 593 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 GPR15P49685 360 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 MPP1Q00013 466 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 GRB14Q14449 540 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 DDR2Q16832 855 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 TMEM198Q66K66 360 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 RGS9BPQ6ZS82 235 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 PHTF2Q8N3S3 785 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 ZNF781Q8N8C0 355 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 ZMIZ2Q8NF64 920 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 COLEC11Q9BWP8 271 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 SLC2A6Q9UGQ3 507 aa13.65□□□□□ -0.22
MCF2L-213ENST00000421756 ATP5HO75947 161 aa13.65□□□□□ -0.23
MCF2L-213ENST00000421756 ACADSBP45954 432 aa13.65□□□□□ -0.23
MCF2L-213ENST00000421756 SH2D5Q6ZV89 423 aa13.65□□□□□ -0.23
MCF2L-213ENST00000421756 CRYBG2Q8N1P7 616 aa13.65□□□□□ -0.23
MCF2L-213ENST00000421756 NAT14Q8WUY8 206 aa13.65□□□□□ -0.23
MCF2L-213ENST00000421756 BHMTQ93088 406 aa13.65□□□□□ -0.23
MCF2L-213ENST00000421756 NUF2Q9BZD4 464 aa13.65□□□□□ -0.23
MCF2L-213ENST00000421756 WWP1Q9H0M0 922 aa13.65□□□□□ -0.23
MCF2L-213ENST00000421756 SPAG6O75602 509 aa13.64□□□□□ -0.23
MCF2L-213ENST00000421756 C1QAP02745 245 aa13.64□□□□□ -0.23
MCF2L-213ENST00000421756 PRKCHP24723 683 aa13.64□□□□□ -0.23
MCF2L-213ENST00000421756 KYAT1Q16773 422 aa13.64□□□□□ -0.23
MCF2L-213ENST00000421756 SPRYD7Q5W111 196 aa13.64□□□□□ -0.23
MCF2L-213ENST00000421756 GDF6Q6KF10 455 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-213ENST00000421756 TAC4Q86UU9 113 aa13.64□□□□□ -0.23
MCF2L-213ENST00000421756 CIR1Q86X95 450 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-213ENST00000421756 USP13Q92995 863 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-213ENST00000421756 ZIC5Q96T25 663 aa13.64□□□□□ -0.23
MCF2L-213ENST00000421756 FAM159BA6NKW6 160 aa13.64□□□□□ -0.23
MCF2L-213ENST00000421756 TMEM233B4DJY2 109 aa13.64□□□□□ -0.23
MCF2L-213ENST00000421756 CPA3P15088 417 aa13.64□□□□□ -0.23
MCF2L-213ENST00000421756 NAGLUP54802 743 aa13.64□□□□□ -0.23
MCF2L-213ENST00000421756 SLC41A1Q8IVJ1 513 aa13.64□□□□□ -0.23
MCF2L-213ENST00000421756 KCTD4Q8WVF5 259 aa13.64□□□□□ -0.23
MCF2L-213ENST00000421756 DNAJC9Q8WXX5 260 aa13.64□□□□□ -0.23
MCF2L-213ENST00000421756 HSFY1Q96LI6 401 aa13.64□□□□□ -0.23
MCF2L-213ENST00000421756 EMCNQ9ULC0 261 aa13.64□□□□□ -0.23
MCF2L-213ENST00000421756 DPYSL4O14531 572 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 TSPAN3O60637 253 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 PRKCGP05129 697 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 MAP2K5Q13163 448 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 RIPK1Q13546 671 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 CNGA3Q16281 694 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 ARHGAP17Q68EM7 881 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 PTAR1Q7Z6K3 402 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-213ENST00000421756 LRRTM3Q86VH5 581 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 KCNMB4Q86W47 210 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.63□□□□□ -0.23
MCF2L-213ENST00000421756 SCG3Q8WXD2 468 aaKnown RBP13.63□□□□□ -0.23
MCF2L-213ENST00000421756 SKA1Q96BD8 255 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 MTBPQ96DY7 904 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 FICDQ9BVA6 458 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 BRD8Q9H0E9 1235 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 NMRK1Q9NWW6 199 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 C5orf42Q9H799 3197 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 SMIM35A0A1B0GVV1 85 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 AURKAO14965 403 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 CIB2O75838 187 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 ELNP15502 786 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 HDCP19113 662 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 SEMA5AQ13591 1074 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 NAPRTQ6XQN6 538 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 ADAM2Q99965 735 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 EBF2Q9HAK2 575 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 DLGAP2Q9P1A6 1054 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 TLK1Q9UKI8 766 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 MTF2Q9Y483 593 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-213ENST00000421756 NT5C1B-RDH14C9J2C7 533 aa13.63□□□□□ -0.23
MCF2L-213ENST00000421756 PLIN3O60664 434 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms