RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 PROZP22891 400 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 CREB5Q02930 508 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 PMF1Q6P1K2 205 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 ZBTB8OSQ8IWT0 167 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 HACE1Q8IYU2 909 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 NUP93Q8N1F7 819 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 GRIN3AQ8TCU5 1115 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 NLRP7Q8WX94 980 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 HTR3CQ8WXA8 447 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 TBCBQ99426 244 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 GATA5Q9BWX5 397 aaPredicted RBP21.73■■□□□ 1.07
USP48-205ENST00000421625 PTPRHQ9HD43 1115 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 HESX1Q9UBX0 185 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 RNF11Q9Y3C5 154 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 DPYSL4O14531 572 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 TMEM132BQ14DG7 1078 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 JADE1Q6IE81 842 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 ALDH16A1Q8IZ83 802 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 PDCD6IPQ8WUM4 868 aaKnown RBP21.73■■□□□ 1.07
USP48-205ENST00000421625 B3GNT5Q9BYG0 378 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 RPF1Q9H9Y2 349 aaKnown RBP21.73■■□□□ 1.07
USP48-205ENST00000421625 WDR41Q9HAD4 459 aa21.73■■□□□ 1.07
USP48-205ENST00000421625 A0A0A0MRY4 1105 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 NFKBIEO00221 500 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 MLNP12872 115 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 PSMC3P17980 439 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 TPP2P29144 1249 aaPredicted RBP21.72■■□□□ 1.07
USP48-205ENST00000421625 SH3D19Q5HYK7 790 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 ZNF513Q8N8E2 541 aaPredicted RBP21.72■■□□□ 1.07
USP48-205ENST00000421625 ZSCAN18Q8TBC5 510 aaPredicted RBP21.72■■□□□ 1.07
USP48-205ENST00000421625 CNDP1Q96KN2 507 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 SPATA13Q96N96 652 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 FCRL3Q96P31 734 aaPredicted RBP21.72■■□□□ 1.07
USP48-205ENST00000421625 PARP14Q460N5 1801 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 C7orf72A4D263 438 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 LACTBL1A8MY62 500 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 ME2P23368 584 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 STAT5BP51692 787 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 SULT2A1Q06520 285 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 GOLGA7BQ2TAP0 167 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 NCBP2-AS2Q69YL0 99 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 KLHL35Q6PF15 583 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 PTAR1Q7Z6K3 402 aaPredicted RBP21.72■■□□□ 1.07
USP48-205ENST00000421625 TSPAN14Q8NG11 270 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 RP9Q8TA86 221 aaKnown RBP21.72■■□□□ 1.07
USP48-205ENST00000421625 CERS2Q96G23 380 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 NUF2Q9BZD4 464 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 SEMA6AQ9H2E6 1030 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 MYOZ2Q9NPC6 264 aa21.72■■□□□ 1.07
USP48-205ENST00000421625 MATN2O00339 956 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 GARSP41250 739 aaKnown RBP21.71■■□□□ 1.07
USP48-205ENST00000421625 HSPA13P48723 471 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 NAB1Q13506 487 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 LPIN1Q14693 890 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 SAMD7Q7Z3H4 446 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 CHERPQ8IWX8 916 aaKnown RBP21.71■■□□□ 1.07
USP48-205ENST00000421625 PGAM4Q8N0Y7 254 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 CXorf38Q8TB03 319 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 RIN3Q8TB24 985 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 AGAP3Q96P47 875 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 CSPG4P5Q96PW8 444 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 KCTD15Q96SI1 283 aaPredicted RBP21.71■■□□□ 1.07
USP48-205ENST00000421625 CCT7Q99832 543 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 CDT1Q9H211 546 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 RSL24D1Q9UHA3 163 aaKnown RBP21.71■■□□□ 1.07
USP48-205ENST00000421625 VPS28Q9UK41 221 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 GJA3Q9Y6H8 435 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 TMEM114B3SHH9 223 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 INO80B-WBP1J3KQ70 363 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 XPO1O14980 1071 aaKnown RBP21.71■■□□□ 1.07
USP48-205ENST00000421625 TRIM13O60858 407 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 BCAS2O75934 225 aaPredicted RBP21.71■■□□□ 1.07
USP48-205ENST00000421625 HNRNPCP07910 306 aaKnown RBP eCLIP21.71■■□□□ 1.074e-6■■■□□ 17
USP48-205ENST00000421625 ZNF26P17031 533 aaPredicted RBP21.71■■□□□ 1.07
USP48-205ENST00000421625 UBA1P22314 1058 aaKnown RBP21.71■■□□□ 1.07
USP48-205ENST00000421625 LCLAT1Q6UWP7 414 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 TRIM67Q6ZTA4 783 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 AGAP2Q99490 1192 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 INO80BQ9C086 356 aaPredicted RBP21.71■■□□□ 1.07
USP48-205ENST00000421625 VPS33BQ9H267 617 aa21.71■■□□□ 1.07
USP48-205ENST00000421625 A0A096LPK6 155 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 ACOT8O14734 319 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 ATP6V1G1O75348 118 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 CAPNS1P04632 268 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 PSMB4P28070 264 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 MAGEA12P43365 314 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 ITGA7Q13683 1181 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 DPYSL2Q16555 572 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 MGAT5BQ3V5L5 792 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 IL23RQ5VWK5 629 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 FSTL4Q6MZW2 842 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 STRA8Q7Z7C7 330 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 PYROXD2Q8N2H3 581 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 AGBL3Q8NEM8 1001 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 ATP6V1E2Q96A05 226 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 TMA16Q96EY4 203 aaKnown RBP21.7■■□□□ 1.07
USP48-205ENST00000421625 CPNE1Q99829 537 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 ILKAPQ9H0C8 392 aaPredicted RBP21.7■■□□□ 1.07
USP48-205ENST00000421625 FAM49BQ9NUQ9 324 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 PADI4Q9UM07 663 aa21.7■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms