RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 SUN2Q9UH99 717 aa20.92■□□□□ 0.94
GTF3A-202ENST00000419181 TBC1D30Q9Y2I9 924 aa20.92■□□□□ 0.94
GTF3A-202ENST00000419181 ITIH6Q6UXX5 1313 aa20.92■□□□□ 0.94
GTF3A-202ENST00000419181 LAMA1P25391 3075 aa20.91■□□□□ 0.94
GTF3A-202ENST00000419181 DRGXA6NNA5 263 aa20.91■□□□□ 0.94
GTF3A-202ENST00000419181 CNTN5O94779 1100 aa20.91■□□□□ 0.94
GTF3A-202ENST00000419181 TNFAIP3P21580 790 aa20.91■□□□□ 0.94
GTF3A-202ENST00000419181 CD6P30203 668 aa20.91■□□□□ 0.94
GTF3A-202ENST00000419181 TPMTP51580 245 aa20.91■□□□□ 0.94
GTF3A-202ENST00000419181 ALFQ53S48 1182 aa20.91■□□□□ 0.94
GTF3A-202ENST00000419181 LYSMD4Q5XG99 296 aa20.91■□□□□ 0.94
GTF3A-202ENST00000419181 WDR59Q6PJI9 974 aa20.91■□□□□ 0.94
GTF3A-202ENST00000419181 CACUL1Q86Y37 369 aa20.91■□□□□ 0.94
GTF3A-202ENST00000419181 MCOLN2Q8IZK6 566 aa20.91■□□□□ 0.94
GTF3A-202ENST00000419181 C12orf50Q8NA57 414 aaPredicted RBP20.91■□□□□ 0.94
GTF3A-202ENST00000419181 FEM1AQ9BSK4 669 aa20.91■□□□□ 0.94
GTF3A-202ENST00000419181 MTG2Q9H4K7 406 aa20.91■□□□□ 0.94
GTF3A-202ENST00000419181 HAUS4Q9H6D7 363 aa20.91■□□□□ 0.94
GTF3A-202ENST00000419181 TAS2R14Q9NYV8 317 aa20.91■□□□□ 0.94
GTF3A-202ENST00000419181 OR51B4Q9Y5P0 310 aa20.91■□□□□ 0.94
GTF3A-202ENST00000419181 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.9■□□□□ 0.94
GTF3A-202ENST00000419181 A0A1W2PQJ5 194 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 E9PAM4 449 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 GDF9O60383 454 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 GPD1P21695 349 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 RRM1P23921 792 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 HDAC4P56524 1084 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 SULT2A1Q06520 285 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 PPP1R15BQ5SWA1 713 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 TCEAL6Q6IPX3 200 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 PPP1R2P3Q6NXS1 205 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 DNAJC24Q6P3W2 148 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 LRRC31Q6UY01 552 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 ZNF571Q7Z3V5 609 aaPredicted RBP20.9■□□□□ 0.94
GTF3A-202ENST00000419181 NETO1Q8TDF5 533 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 TCEAL3Q969E4 200 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 VCPIP1Q96JH7 1222 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 RPL10LQ96L21 214 aaKnown RBP20.9■□□□□ 0.94
GTF3A-202ENST00000419181 PPP1R9BQ96SB3 815 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 NUP58Q9BVL2 599 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 RXFP3Q9NSD7 469 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 WSB2Q9NYS7 404 aaPredicted RBP20.9■□□□□ 0.94
GTF3A-202ENST00000419181 SLCO3A1Q9UIG8 710 aa20.9■□□□□ 0.94
GTF3A-202ENST00000419181 PI4KAP42356 2102 aa20.89■□□□□ 0.94
GTF3A-202ENST00000419181 TTC34A8MYJ7 566 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 SIN3BO75182 1162 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 ACADMP11310 421 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 ITPKAP23677 461 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 ADRA1BP35368 520 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 NUMBP49757 651 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 STK19P49842 368 aaPredicted RBP20.89■□□□□ 0.93
GTF3A-202ENST00000419181 RPS14P62263 151 aaKnown RBP20.89■□□□□ 0.93
GTF3A-202ENST00000419181 ZBTB16Q05516 673 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 ZNF33AQ06730 810 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 KLHL30Q0D2K2 578 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 AASDHQ4L235 1098 aaPredicted RBP20.89■□□□□ 0.93
GTF3A-202ENST00000419181 PEAR1Q5VY43 1037 aaPredicted RBP20.89■□□□□ 0.93
GTF3A-202ENST00000419181 RNF219Q5W0B1 726 aaPredicted RBP20.89■□□□□ 0.93
GTF3A-202ENST00000419181 SYT12Q8IV01 421 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 SLC41A1Q8IVJ1 513 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 DEFB119Q8N690 84 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 FAM172AQ8WUF8 416 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 PIGKQ92643 395 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 TOE1Q96GM8 510 aaKnown RBP20.89■□□□□ 0.93
GTF3A-202ENST00000419181 MCEEQ96PE7 176 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 RSPH9Q9H1X1 276 aaPredicted RBP20.89■□□□□ 0.93
GTF3A-202ENST00000419181 TMEM74BQ9NUR3 256 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 MPP6Q9NZW5 540 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 IFNKQ9P0W0 207 aa20.89■□□□□ 0.93
GTF3A-202ENST00000419181 TARSL2A2RTX5 802 aaKnown RBP20.88■□□□□ 0.93
GTF3A-202ENST00000419181 NDUFS2O75306 463 aa20.88■□□□□ 0.93
GTF3A-202ENST00000419181 OXTRP30559 389 aa20.88■□□□□ 0.93
GTF3A-202ENST00000419181 DPP6P42658 865 aa20.88■□□□□ 0.93
GTF3A-202ENST00000419181 VASPP50552 380 aaPredicted RBP20.88■□□□□ 0.93
GTF3A-202ENST00000419181 ZNF143P52747 638 aaPredicted RBP20.88■□□□□ 0.93
GTF3A-202ENST00000419181 RPL7AP62424 266 aaKnown RBP20.88■□□□□ 0.93
GTF3A-202ENST00000419181 NRG1Q02297 640 aaPredicted RBP20.88■□□□□ 0.93
GTF3A-202ENST00000419181 ARL13BQ3SXY8 428 aa20.88■□□□□ 0.93
GTF3A-202ENST00000419181 C9orf64Q5T6V5 341 aa20.88■□□□□ 0.93
GTF3A-202ENST00000419181 ZNF776Q68DI1 518 aaPredicted RBP20.88■□□□□ 0.93
GTF3A-202ENST00000419181 SETD3Q86TU7 594 aaPredicted RBP20.88■□□□□ 0.93
GTF3A-202ENST00000419181 ZNF419Q96HQ0 510 aaPredicted RBP20.88■□□□□ 0.93
GTF3A-202ENST00000419181 HSPA12BQ96MM6 686 aa20.88■□□□□ 0.93
GTF3A-202ENST00000419181 ZNF212Q9UDV6 495 aa20.88■□□□□ 0.93
GTF3A-202ENST00000419181 VPS28Q9UK41 221 aa20.88■□□□□ 0.93
GTF3A-202ENST00000419181 PILRBQ9UKJ0 227 aa20.88■□□□□ 0.93
GTF3A-202ENST00000419181 NUMA1Q14980 2115 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 ATXN2Q99700 1313 aaKnown RBP20.87■□□□□ 0.93
GTF3A-202ENST00000419181 EDDM13A0A1B0GTR0 161 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 ANKRD62A6NC57 917 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 TMCO5BA8MYB1 307 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 PATE3B3GLJ2 98 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 DDX3XO00571 662 aaKnown RBP eCLIP20.87■□□□□ 0.935e-21■■■■■ 78.7
GTF3A-202ENST00000419181 CCP110O43303 1012 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 SRGAP2O75044 1071 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 RHOCP08134 193 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 GZMAP12544 262 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 HOXD12P35452 270 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 MANEALQ5VSG8 457 aa20.87■□□□□ 0.93
GTF3A-202ENST00000419181 TFAP2DQ7Z6R9 452 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms