RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TAF1DQ9H5J8 278 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 RMI1Q9H9A7 625 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 PLEKHA2Q9HB19 425 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 ZNF304Q9HCX3 659 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 G6PC2Q9NQR9 355 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 NDUFAF4Q9P032 175 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 IPO11Q9UI26 975 aaKnown RBP4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 DTX4Q9Y2E6 619 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 HS3ST3B1Q9Y662 390 aa4.95□□□□□ -1.62
HMGB1P49-201ENST00000418882 TMEM272A0A1B0GTI8 110 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 TCRBV7S3A2A0A539 114 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 C17orf100A8MU93 164 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 KCNJ18B7U540 433 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 E7EVH7 732 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 USP12O75317 370 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 KRT38O76015 456 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 NDUFB8O95169 186 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 NFATC1O95644 943 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 IGKV2-30P06310 120 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 CHN1P15882 459 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 ME1P48163 572 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 TAF5Q15542 800 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 INPP5JQ15735 1006 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 GRAMD1BQ3KR37 738 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 TBRG1Q3YBR2 411 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 B4GALNT4Q76KP1 1039 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 MOGAT3Q86VF5 341 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 C2CD4CQ8TF44 421 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 TRAPPC12Q8WVT3 735 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 CLPBQ9H078 707 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 Q9N2J8 555 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 TLR8Q9NR97 1041 aaKnown RBP4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 ARL15Q9NXU5 204 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 SLC8A2Q9UPR5 921 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 PCDHGB3Q9Y5G1 929 aa4.94□□□□□ -1.62
HMGB1P49-201ENST00000418882 FOXO6A8MYZ6 492 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 TOMM40O96008 361 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 TYK2P29597 1187 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 CIITAP33076 1130 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 GRK6P43250 576 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 LAMB3Q13751 1172 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 PRKG1Q13976 671 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 ZNF260Q3ZCT1 412 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 ZNF484Q5JVG2 852 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 C6orf10Q5SRN2 563 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 C10orf76Q5T2E6 689 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 ANO1Q5XXA6 986 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 VPS52Q8N1B4 723 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 GALNT15Q8N3T1 639 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 ENDOVQ8N8Q3 282 aaKnown RBP4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 KCNJ9Q92806 393 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 HMCESQ96FZ2 354 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 PIGSQ96S52 555 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 WDR83Q9BRX9 315 aaKnown RBP4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 TWSG1Q9GZX9 223 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 TMEM248Q9NWD8 314 aa4.93□□□□□ -1.62
HMGB1P49-201ENST00000418882 MSI1O43347 362 aaKnown RBP4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 ADD2P35612 726 aa4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 GALNT3Q14435 633 aa4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 DLGAP5Q15398 846 aa4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 ENTPD8Q5MY95 495 aa4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 HMBOX1Q6NT76 420 aa4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 COLCA1Q6ZS62 124 aa4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 CYB5R4Q7L1T6 521 aa4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 SCN4BQ8IWT1 228 aa4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 PTGR2Q8N8N7 351 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 OR6Y1Q8NGX8 325 aa4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 THAP4Q8WY91 577 aa4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 GOLGA1Q92805 767 aa4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 SLC25A28Q96A46 364 aa4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 TBC1D20Q96BZ9 403 aa4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 KTI12Q96EK9 354 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 LTV1Q96GA3 475 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 MAP6D1Q9H9H5 199 aa4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 ITM2CQ9NQX7 267 aa4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 FEM1BQ9UK73 627 aa4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 MORC2Q9Y6X9 1032 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P49-201ENST00000418882 hCG_1642624A0A1W2PR95 340 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 DPPA5A6NC42 116 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 PRPF4O43172 522 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 NTN1O95631 604 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 TMEM191BP0C7N4 346 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 PKMP14618 531 aaKnown RBP4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 ARSAP15289 507 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 PCP4P48539 62 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 PDCD2Q16342 344 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 ISM2Q6H9L7 571 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 RFX8Q6ZV50 586 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 ANKS1BQ7Z6G8 1248 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 KLBQ86Z14 1044 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 ZNF366Q8N895 744 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 LINS1Q8NG48 757 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 MPLKIPQ8TAP9 179 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 RUBCNQ92622 972 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 ZNF419Q96HQ0 510 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 CLMNQ96JQ2 1002 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 MYLK2Q9H1R3 596 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 ACAD9Q9H845 621 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 CHODLQ9H9P2 273 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 PPCSQ9HAB8 311 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms