RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 FRS2Q8WU20 508 aa21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 VPS45Q9NRW7 570 aa21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 CHD5Q8TDI0 1954 aa21.23■□□□□ 0.99
PKNOX1-202ENST00000418336 PATE3B3GLJ2 98 aa21.22■□□□□ 0.99
PKNOX1-202ENST00000418336 E9PAM4 449 aa21.22■□□□□ 0.99
PKNOX1-202ENST00000418336 SYNCRIPO60506 623 aaKnown RBP21.22■□□□□ 0.99
PKNOX1-202ENST00000418336 CLDN11O75508 207 aa21.22■□□□□ 0.99
PKNOX1-202ENST00000418336 RPS14P62263 151 aaKnown RBP21.22■□□□□ 0.99
PKNOX1-202ENST00000418336 ECT2LQ008S8 904 aa21.22■□□□□ 0.99
PKNOX1-202ENST00000418336 NRG1Q02297 640 aaPredicted RBP21.22■□□□□ 0.99
PKNOX1-202ENST00000418336 ASIC2Q16515 512 aa21.22■□□□□ 0.99
PKNOX1-202ENST00000418336 SFMBT2Q5VUG0 894 aa21.22■□□□□ 0.99
PKNOX1-202ENST00000418336 LPCAT2Q7L5N7 544 aa21.22■□□□□ 0.99
PKNOX1-202ENST00000418336 SIPA1Q96FS4 1042 aa21.22■□□□□ 0.99
PKNOX1-202ENST00000418336 ZNF419Q96HQ0 510 aaPredicted RBP21.22■□□□□ 0.99
PKNOX1-202ENST00000418336 RSPH9Q9H1X1 276 aaPredicted RBP21.22■□□□□ 0.99
PKNOX1-202ENST00000418336 MPP6Q9NZW5 540 aa21.22■□□□□ 0.99
PKNOX1-202ENST00000418336 PILRBQ9UKJ0 227 aa21.22■□□□□ 0.99
PKNOX1-202ENST00000418336 NUMA1Q14980 2115 aa21.22■□□□□ 0.99
PKNOX1-202ENST00000418336 PCDH15Q96QU1 1955 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 PRR5-ARHGAP8B1AHC4 643 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 FAM72CH0Y354 149 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 SIN3BO75182 1162 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 CCDC172P0C7W6 258 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 ITPKAP23677 461 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 CD6P30203 668 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 SDC4P31431 198 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 ADRA1BP35368 520 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 DHPSP49366 369 aaPredicted RBP21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 UBASH3AP57075 661 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 ARHGAP8P85298 464 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 ACBD5Q5T8D3 534 aaPredicted RBP21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 FAM72AQ5TYM5 149 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 FAM72DQ6L9T8 149 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 SLC36A4Q6YBV0 504 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 SND1Q7KZF4 910 aaKnown RBP eCLIP21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 ARMCX6Q7L4S7 300 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 FAM72BQ86X60 149 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 DEFB119Q8N690 84 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 CCDC185Q8N715 623 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 FAM172AQ8WUF8 416 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 PTPRN2Q92932 1015 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 VCPIP1Q96JH7 1222 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 RPL10LQ96L21 214 aaKnown RBP21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 FAM129BQ96TA1 746 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 SEPT11Q9NVA2 429 aaKnown RBP21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 PPARGC1AQ9UBK2 798 aaKnown RBP21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 PAXBP1Q9Y5B6 917 aa21.21■□□□□ 0.99
PKNOX1-202ENST00000418336 AP5Z1O43299 807 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 CCP110O43303 1012 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 GYPCP04921 128 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 SKILP12757 684 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 VAV1P15498 845 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 GPD1P21695 349 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 ZNF143P52747 638 aaPredicted RBP21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 RPL6Q02878 288 aaKnown RBP21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 ZNF252P-AS1Q0IIN9 211 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 SCAPQ12770 1279 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 MAMLD1Q13495 774 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 CDO1Q16878 200 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 PLEKHA7Q6IQ23 1121 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 CYP2U1Q7Z449 544 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 NLRP14Q86W24 1093 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 ARFGAP1Q8N6T3 406 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 PRCCQ92733 491 aaPredicted RBP21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 NTAN1Q96AB6 310 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 TOE1Q96GM8 510 aaKnown RBP21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 SELENOOQ9BVL4 669 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 OSBPL2Q9H1P3 480 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 FBRSQ9HAH7 460 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 IFNKQ9P0W0 207 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 SUN2Q9UH99 717 aa21.2■□□□□ 0.98
PKNOX1-202ENST00000418336 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 A0A0D9SEW6 157 aa21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 LNP1A1A4G5 178 aa21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 TM4SF5O14894 197 aa21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 MAP3K13O43283 966 aa21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 GZMAP12544 262 aa21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 TNFAIP3P21580 790 aa21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 LIMK1P53667 647 aa21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 ZNF33AQ06730 810 aa21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 ZNF177Q13360 481 aaPredicted RBP21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 LYSMD4Q5XG99 296 aa21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 DNAJC24Q6P3W2 148 aa21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 CACUL1Q86Y37 369 aa21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 SYN2Q92777 582 aaPredicted RBP21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 MCEEQ96PE7 176 aa21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 NDFIP2Q9NV92 336 aa21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 EVLQ9UI08 416 aaPredicted RBP21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 CAPN11Q9UMQ6 739 aa21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 NENFQ9UMX5 172 aa21.19■□□□□ 0.98
PKNOX1-202ENST00000418336 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 SLC30A4O14863 429 aa21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 ATMINO43313 823 aaPredicted RBP21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 ATP9BO43861 1147 aa21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 FOXD2O60548 495 aaPredicted RBP21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 MOCS3O95396 460 aa21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 OXCT1P55809 520 aa21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 ZBTB16Q05516 673 aa21.18■□□□□ 0.98
PKNOX1-202ENST00000418336 NFKBIBQ15653 356 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms