RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 SDCBP2Q9H190 292 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 CYP26B1Q9NR63 512 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 RBAKQ9NYW8 714 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 AFG3L2Q9Y4W6 797 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 SNX9Q9Y5X1 595 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 CPQQ9Y646 472 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 GOLGA8QA0A0J9YX86 632 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 GOLGA8OA6NCC3 632 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 GOLGA8NF8WBI6 632 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 LYPLA2O95372 231 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 NDUFB10O96000 172 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 GNAO1P09471 354 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 ZNF182P17025 639 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 TNNI1P19237 187 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 GARTP22102 1010 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 TKTP29401 623 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 YWHABP31946 246 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 QARSP47897 775 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 GRSF1Q12849 480 aaKnown RBP eCLIP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 GRAPQ13588 217 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 TRIM25Q14258 630 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 PTK2BQ14289 1009 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 FAM102BQ5T8I3 360 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 CYP4A22Q5TCH4 519 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 SCARA3Q6AZY7 606 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 ZBTB49Q6ZSB9 765 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 GMCL1P1Q8NEA9 526 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 GRAPLQ8TC17 118 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 CALN1Q9BXU9 219 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 RSAD1Q9HA92 442 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 VTA1Q9NP79 307 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 SEPT3Q9UH03 358 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 PCDHAC2Q9Y5I4 1007 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 TMEM150BA6NC51 233 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 AMHP03971 560 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 SLC7A1P30825 629 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 PSMD8P48556 350 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 TRAF2Q12933 501 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 DMP1Q13316 513 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 ARL13BQ3SXY8 428 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 FAM182AQ5T1J6 154 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 HMBOX1Q6NT76 420 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 FAM117BQ6P1L5 589 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 GALNT18Q6P9A2 607 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 ZNF534Q76KX8 674 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 PTAR1Q7Z6K3 402 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 TTC30AQ86WT1 665 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 HERC6Q8IVU3 1022 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 CADM3Q8N126 398 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 MPP5Q8N3R9 675 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 ANKFN1Q8N957 763 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 MFSD2AQ8NA29 543 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 TDRD5Q8NAT2 981 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 FNIP1Q8TF40 1166 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 ZNF518BQ9C0D4 1074 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 NDEL1Q9GZM8 345 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 WDR55Q9H6Y2 383 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 EHMT1Q9H9B1 1298 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 POLR1BQ9H9Y6 1135 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 KLHL3Q9UH77 587 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 DAPK2Q9UIK4 370 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 RBMX2Q9Y388 322 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 PTPRJQ12913 1337 aa8.19□□□□□ -1.1
HMGXB4-202ENST00000418170 KLRG2A4D1S0 409 aaPredicted RBP8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 TMEM114B3SHH9 223 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 H7C0C1 242 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 HNRNPDLO14979 420 aaKnown RBP8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 KCNN4O15554 427 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 ATP5OP48047 213 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 ARPC4P59998 168 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 CHSY3Q70JA7 882 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 COLGALT2Q8IYK4 626 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 WDTC1Q8N5D0 677 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 CNTD1Q8N815 330 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 WNK4Q96J92 1243 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 ALPK1Q96QP1 1244 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 NOL11Q9H8H0 719 aaKnown RBP8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 XPNPEP3Q9NQH7 507 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 KMT5AQ9NQR1 393 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 SMOXQ9NWM0 555 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 ERVK-11Q9UQG0 969 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 NUB1Q9Y5A7 615 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 SOCS2O14508 198 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 NOL3O60936 208 aaKnown RBP8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 CLPXO76031 633 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 CKMT2P17540 419 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 CCNA2P20248 432 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 GRM5P41594 1212 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 NME5P56597 212 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 WNT7BP56706 349 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 TAF5Q15542 800 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 CRY2Q49AN0 593 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 FAM47CQ5HY64 1035 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 NAPRTQ6XQN6 538 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 ZC3H7AQ8IWR0 971 aaKnown RBP8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 PDPRQ8NCN5 879 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 JOSD2Q8TAC2 188 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 PGBD4Q96DM1 585 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 VRTNQ9H8Y1 702 aa8.18□□□□□ -1.1
HMGXB4-202ENST00000418170 ZBTB26Q9HCK0 441 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms