RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 TGM2P21980 687 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 FCARP24071 287 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 IVDP26440 423 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 CHRNA3P32297 505 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 GMPRP36959 345 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 TERF1P54274 439 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 TPI1P60174 286 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 GALNT2Q10471 571 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 SNX1Q13596 522 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 TFDP2Q14188 446 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 PRKD1Q15139 912 aaPredicted RBP7.04□□□□□ -1.28
CPS1-202ENST00000417946 ZNF77Q15935 545 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 TAF12Q16514 161 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 ARL13BQ3SXY8 428 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 RARS2Q5T160 578 aaKnown RBP7.04□□□□□ -1.28
CPS1-202ENST00000417946 GPR158Q5T848 1215 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 RFWD3Q6PCD5 774 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 C1orf228Q6PIY5 440 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 PDZD4Q76G19 769 aaPredicted RBP7.04□□□□□ -1.28
CPS1-202ENST00000417946 B4GALNT4Q76KP1 1039 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 SND1Q7KZF4 910 aaKnown RBP eCLIP7.04□□□□□ -1.28
CPS1-202ENST00000417946 TADA2BQ86TJ2 420 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 CIR1Q86X95 450 aaPredicted RBP7.04□□□□□ -1.28
CPS1-202ENST00000417946 JAMLQ86YT9 394 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 MAP7D3Q8IWC1 876 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 CCDC33Q8N5R6 958 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 RTL3Q8N8U3 475 aaKnown RBP7.04□□□□□ -1.28
CPS1-202ENST00000417946 MAB21L3Q8N8X9 362 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 LEMD2Q8NC56 503 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 OR52K2Q8NGK3 314 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 ZSCAN18Q8TBC5 510 aaPredicted RBP7.04□□□□□ -1.28
CPS1-202ENST00000417946 ING5Q8WYH8 240 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 MRPS31Q92665 395 aaKnown RBP7.04□□□□□ -1.28
CPS1-202ENST00000417946 AZIN2Q96A70 460 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 MAGOHBQ96A72 148 aaKnown RBP7.04□□□□□ -1.28
CPS1-202ENST00000417946 TBC1D31Q96DN5 1066 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 RTP4Q96DX8 246 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 MSLNLQ96KJ4 702 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 QKIQ96PU8 341 aaKnown RBP eCLIP7.04□□□□□ -1.281e-6■■■■□ 21.2
CPS1-202ENST00000417946 NAP1L3Q99457 506 aaPredicted RBP7.04□□□□□ -1.28
CPS1-202ENST00000417946 APOL5Q9BWW9 433 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 ATXN3LQ9H3M9 355 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 IGFLR1Q9H665 355 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 TASP1Q9H6P5 420 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 USP29Q9HBJ7 922 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 TMEM51Q9NW97 253 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 MPP6Q9NZW5 540 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 CFAP97Q9P2B7 532 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 PPARGC1AQ9UBK2 798 aaKnown RBP7.04□□□□□ -1.28
CPS1-202ENST00000417946 SZT2Q5T011 3432 aa7.04□□□□□ -1.28
CPS1-202ENST00000417946 MUC22E2RYF6 1773 aaPredicted RBP7.03□□□□□ -1.28
CPS1-202ENST00000417946 UQCRHLA0A096LP55 91 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 TRAV19A0A0A6YYK7 116 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 GOLGA6L10A0A0M3HER8 536 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 ESYT3A0FGR9 886 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 CFAP99D6REC4 459 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 LEFTY2O00292 366 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 FGF10O15520 208 aaPredicted RBP7.03□□□□□ -1.28
CPS1-202ENST00000417946 ZIC2O95409 532 aaPredicted RBP7.03□□□□□ -1.28
CPS1-202ENST00000417946 FGF19O95750 216 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 LATS1O95835 1130 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 PEX11BO96011 259 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 ITGAVP06756 1048 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 UQCRHP07919 91 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 RHOXF2BP0C7M4 288 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 IRF1P10914 325 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 ETS1P14921 441 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 DDX6P26196 483 aaKnown RBP eCLIP7.03□□□□□ -1.28
CPS1-202ENST00000417946 EPHB2P29323 1055 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 WEE1P30291 646 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 HTR7P34969 479 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 ARL4AP40617 200 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 KPNA1P52294 538 aaPredicted RBP7.03□□□□□ -1.28
CPS1-202ENST00000417946 ZNF135P52742 658 aaPredicted RBP7.03□□□□□ -1.28
CPS1-202ENST00000417946 VSNL1P62760 191 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 RPS24P62847 133 aaKnown RBP7.03□□□□□ -1.28
CPS1-202ENST00000417946 COG7P83436 770 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 SLC7A5Q01650 507 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 PTK6Q13882 451 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 CLUL1Q15846 466 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 ZFYVE27Q5T4F4 411 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 DUPD1Q68J44 220 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 CCDC137Q6PK04 289 aaKnown RBP7.03□□□□□ -1.28
CPS1-202ENST00000417946 ZDHHC24Q6UX98 284 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 ARHGAP36Q6ZRI8 547 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 HTR3DQ70Z44 454 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 DENND1CQ8IV53 801 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 UNC45BQ8IWX7 931 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 BBS7Q8IWZ6 715 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 CMTM8Q8IZV2 173 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 UMODL1-AS1Q8N2C9 162 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 ELMOD1Q8N336 334 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 ALLCQ8N6M5 410 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 ATP6V0D2Q8N8Y2 350 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 SH3RF2Q8TEC5 729 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 DEPDC1BQ8WUY9 529 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 MAIP1Q8WWC4 291 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 CASKIN2Q8WXE0 1202 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 RNF34Q969K3 372 aa7.03□□□□□ -1.28
CPS1-202ENST00000417946 PPP2R3CQ969Q6 453 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms