RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 RPL17P18621 184 aaKnown RBP17.2■□□□□ 0.34
SSBP3-205ENST00000417664 DNAJB2P25686 324 aa17.2■□□□□ 0.34
SSBP3-205ENST00000417664 ATP5C1P36542 298 aaKnown RBP17.2■□□□□ 0.34
SSBP3-205ENST00000417664 VEPH1Q14D04 833 aa17.2■□□□□ 0.34
SSBP3-205ENST00000417664 ZSCAN26Q16670 478 aa17.2■□□□□ 0.34
SSBP3-205ENST00000417664 ANO4Q32M45 955 aa17.2■□□□□ 0.34
SSBP3-205ENST00000417664 MIB1Q86YT6 1006 aa17.2■□□□□ 0.34
SSBP3-205ENST00000417664 KLHDC8BQ8IXV7 354 aa17.2■□□□□ 0.34
SSBP3-205ENST00000417664 AGGF1Q8N302 714 aaeCLIP17.2■□□□□ 0.342e-6■□□□□ 9.7
SSBP3-205ENST00000417664 NETO2Q8NC67 525 aa17.2■□□□□ 0.34
SSBP3-205ENST00000417664 GSDMBQ8TAX9 411 aa17.2■□□□□ 0.34
SSBP3-205ENST00000417664 ZSCAN18Q8TBC5 510 aaPredicted RBP17.2■□□□□ 0.34
SSBP3-205ENST00000417664 SLC44A1Q8WWI5 657 aa17.2■□□□□ 0.34
SSBP3-205ENST00000417664 CELF6Q96J87 481 aaKnown RBP17.2■□□□□ 0.34
SSBP3-205ENST00000417664 SSU72Q9NP77 194 aaKnown RBP17.2■□□□□ 0.34
SSBP3-205ENST00000417664 MAGED2Q9UNF1 606 aaPredicted RBP17.2■□□□□ 0.34
SSBP3-205ENST00000417664 TMEM120BA0PK00 339 aa17.19■□□□□ 0.34
SSBP3-205ENST00000417664 DRGXA6NNA5 263 aa17.19■□□□□ 0.34
SSBP3-205ENST00000417664 DFFAO00273 331 aa17.19■□□□□ 0.34
SSBP3-205ENST00000417664 ZBTB24O43167 697 aaPredicted RBP17.19■□□□□ 0.34
SSBP3-205ENST00000417664 MAFKO60675 156 aa17.19■□□□□ 0.34
SSBP3-205ENST00000417664 CCNB1P14635 433 aa17.19■□□□□ 0.34
SSBP3-205ENST00000417664 KRT15P19012 456 aa17.19■□□□□ 0.34
SSBP3-205ENST00000417664 STEAP4Q687X5 459 aa17.19■□□□□ 0.34
SSBP3-205ENST00000417664 C14orf80Q86SX3 495 aa17.19■□□□□ 0.34
SSBP3-205ENST00000417664 SRRM1Q8IYB3 904 aaKnown RBP17.19■□□□□ 0.34
SSBP3-205ENST00000417664 STAMBPL1Q96FJ0 436 aa17.19■□□□□ 0.34
SSBP3-205ENST00000417664 ZNF512Q96ME7 567 aaPredicted RBP17.19■□□□□ 0.34
SSBP3-205ENST00000417664 IL12RB2Q99665 862 aa17.19■□□□□ 0.34
SSBP3-205ENST00000417664 SLC39A8Q9C0K1 460 aa17.19■□□□□ 0.34
SSBP3-205ENST00000417664 MRPL17Q9NRX2 175 aaKnown RBP17.19■□□□□ 0.34
SSBP3-205ENST00000417664 UXTQ9UBK9 157 aaPredicted RBP17.19■□□□□ 0.34
SSBP3-205ENST00000417664 ZNF180Q9UJW8 692 aa17.19■□□□□ 0.34
SSBP3-205ENST00000417664 SMG5Q9UPR3 1016 aaKnown RBP17.19■□□□□ 0.34
SSBP3-205ENST00000417664 PCDHB12Q9Y5F1 795 aa17.19■□□□□ 0.34
SSBP3-205ENST00000417664 PCDHA11Q9Y5I1 949 aa17.19■□□□□ 0.34
SSBP3-205ENST00000417664 MAD1L1Q9Y6D9 718 aa17.19■□□□□ 0.34
SSBP3-205ENST00000417664 MYO18AQ92614 2054 aaKnown RBP17.18■□□□□ 0.34
SSBP3-205ENST00000417664 NUP205Q92621 2012 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 IQANK1A0A1B0GTG1 560 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 GMNCA6NCL1 334 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 ZNF840PA6NDX5 716 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 ARHGAP42A6NI28 874 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 PRPF4O43172 522 aaKnown RBP eCLIP17.18■□□□□ 0.34
SSBP3-205ENST00000417664 JCHAINP01591 159 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 INHBAP08476 426 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 HMGA1P17096 107 aaKnown RBP17.18■□□□□ 0.34
SSBP3-205ENST00000417664 ELF1P32519 619 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 IFNAR2P48551 515 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 ZBTB17Q13105 803 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 MTM1Q13496 603 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 HECTD3Q5T447 861 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 KCTD11Q693B1 232 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 FAM117BQ6P1L5 589 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 ZNF449Q6P9G9 518 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 LRRC6Q86X45 466 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 TCEAL8Q8IYN2 117 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 MDM1Q8TC05 714 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 DCAKDQ8WVC6 231 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 AZIN2Q96A70 460 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 ALKBH8Q96BT7 664 aaKnown RBP17.18■□□□□ 0.34
SSBP3-205ENST00000417664 CFAP36Q96G28 342 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 SGSM3Q96HU1 749 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 AGAP3Q96P47 875 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 SMC6Q96SB8 1091 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 PRMT1Q99873 361 aaKnown RBP17.18■□□□□ 0.34
SSBP3-205ENST00000417664 CEP41Q9BYV8 373 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 CCSER2Q9H7U1 834 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 LRRC40Q9H9A6 602 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 CYP4F11Q9HBI6 524 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 TRPM5Q9NZQ8 1165 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 VANGL2Q9ULK5 521 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 AAR2Q9Y312 384 aaKnown RBP17.18■□□□□ 0.34
SSBP3-205ENST00000417664 TTLL3Q9Y4R7 772 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 YIPF1Q9Y548 306 aa17.18■□□□□ 0.34
SSBP3-205ENST00000417664 SEC24AO95486 1093 aa17.17■□□□□ 0.34
SSBP3-205ENST00000417664 FAM107AO95990 144 aa17.17■□□□□ 0.34
SSBP3-205ENST00000417664 CD68P34810 354 aaPredicted RBP17.17■□□□□ 0.34
SSBP3-205ENST00000417664 PPIGQ13427 754 aaKnown RBP eCLIP17.17■□□□□ 0.344e-9■■□□□ 14.2
SSBP3-205ENST00000417664 TAF12Q16514 161 aa17.17■□□□□ 0.34
SSBP3-205ENST00000417664 KBTBD12Q3ZCT8 623 aa17.17■□□□□ 0.34
SSBP3-205ENST00000417664 LGSNQ5TDP6 509 aa17.17■□□□□ 0.34
SSBP3-205ENST00000417664 UNC5AQ6ZN44 842 aa17.17■□□□□ 0.34
SSBP3-205ENST00000417664 LINC00523Q86TU6 105 aa17.17■□□□□ 0.34
SSBP3-205ENST00000417664 SLC26A11Q86WA9 606 aa17.17■□□□□ 0.34
SSBP3-205ENST00000417664 ATXN2LQ8WWM7 1075 aaKnown RBP17.17■□□□□ 0.34
SSBP3-205ENST00000417664 KCNK9Q9NPC2 374 aa17.17■□□□□ 0.34
SSBP3-205ENST00000417664 NKIRAS1Q9NYS0 192 aa17.17■□□□□ 0.34
SSBP3-205ENST00000417664 MPP6Q9NZW5 540 aa17.17■□□□□ 0.34
SSBP3-205ENST00000417664 KIAA0100Q14667 2235 aaKnown RBP17.17■□□□□ 0.34
SSBP3-205ENST00000417664 NDUFAB1O14561 156 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 ANXA9O76027 345 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 ALDH1A2O94788 518 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 C1QAP02745 245 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 PGAM1P18669 254 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 GBP2P32456 591 aaPredicted RBP17.16■□□□□ 0.34
SSBP3-205ENST00000417664 GRIA1P42261 906 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 MAPKAPK2P49137 400 aa17.16■□□□□ 0.34
SSBP3-205ENST00000417664 HARS2P49590 506 aaKnown RBP17.16■□□□□ 0.34
SSBP3-205ENST00000417664 C5orf22Q49AR2 442 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms