RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 ACAP1Q15027 740 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 CRY1Q16526 586 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 PTPRNQ16849 979 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 FNDC3BQ53EP0 1204 aaKnown RBP12.83□□□□□ -0.36
SKA1-203ENST00000417656 HEATR6Q6AI08 1181 aaKnown RBP12.83□□□□□ -0.36
SKA1-203ENST00000417656 TXNRD3NBQ6F5E7 133 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 TMEM92Q6UXU6 159 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 ACRBPQ8NEB7 543 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 TSTD1Q8NFU3 115 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 SLC35G2Q8TBE7 412 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 KCTD15Q96SI1 283 aaPredicted RBP12.83□□□□□ -0.36
SKA1-203ENST00000417656 EIF3CQ99613 913 aaKnown RBP12.83□□□□□ -0.36
SKA1-203ENST00000417656 EPAS1Q99814 870 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 DHX35Q9H5Z1 703 aaKnown RBP12.83□□□□□ -0.36
SKA1-203ENST00000417656 ZWILCHQ9H900 591 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 FAM86C1Q9NVL1 165 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 THAP10Q9P2Z0 257 aaPredicted RBP12.83□□□□□ -0.36
SKA1-203ENST00000417656 INTUQ9ULD6 942 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 USP18Q9UMW8 372 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 TBC1D30Q9Y2I9 924 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 REXO2Q9Y3B8 237 aaKnown RBP12.83□□□□□ -0.36
SKA1-203ENST00000417656 PCDHA13Q9Y5I0 950 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 EPN1Q9Y6I3 576 aaPredicted RBP12.83□□□□□ -0.36
SKA1-203ENST00000417656 STON1Q9Y6Q2 735 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 WDFY4Q6ZS81 3184 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 FANCMQ8IYD8 2048 aa12.83□□□□□ -0.36
SKA1-203ENST00000417656 EML5Q05BV3 1969 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 TCRBV21S2A2A0A5A6 115 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 WASH3PC4AMC7 463 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 MTA2O94776 668 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 MOCS3O95396 460 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 APBB3O95704 486 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 DLDP09622 509 aaKnown RBP12.82□□□□□ -0.36
SKA1-203ENST00000417656 HLA-EP13747 358 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 RHOQP17081 205 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 EPHB2P29323 1055 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 SSR1P43307 286 aaKnown RBP12.82□□□□□ -0.36
SKA1-203ENST00000417656 OXCT1P55809 520 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 GSDMDP57764 484 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 TPI1P60174 286 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 KCNT1Q5JUK3 1230 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 C6orf118Q5T5N4 469 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 ERMARDQ5T6L9 678 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 RNF219Q5W0B1 726 aaPredicted RBP12.82□□□□□ -0.36
SKA1-203ENST00000417656 ANO7Q6IWH7 933 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 KIAA1211LQ6NV74 962 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 SERPINA13PQ6UXR4 307 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 SETD3Q86TU7 594 aaPredicted RBP12.82□□□□□ -0.36
SKA1-203ENST00000417656 NLRP14Q86W24 1093 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 RHOT2Q8IXI1 618 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 ZNF366Q8N895 744 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 HSPH1Q92598 858 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 TTC17Q96AE7 1141 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 ALG14Q96F25 216 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 GABRG3Q99928 467 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 NCAPGQ9BPX3 1015 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 MUC3BQ9H195 1237 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 VPS28Q9UK41 221 aa12.82□□□□□ -0.36
SKA1-203ENST00000417656 A0A1W2PQF6 199 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 EEF2KO00418 725 aaKnown RBP12.81□□□□□ -0.36
SKA1-203ENST00000417656 TIMM44O43615 452 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 IPO7O95373 1038 aaKnown RBP12.81□□□□□ -0.36
SKA1-203ENST00000417656 ASLP04424 464 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 ATP5BP06576 529 aaKnown RBP12.81□□□□□ -0.36
SKA1-203ENST00000417656 OR1E1P30953 314 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 MAN1A1P33908 653 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 MAPKAPK2P49137 400 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 FNTBP49356 437 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 STK19P49842 368 aaPredicted RBP12.81□□□□□ -0.36
SKA1-203ENST00000417656 DGKEP52429 567 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 TAS2R40P59535 323 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 SLC12A1Q13621 1099 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 ENPP2Q13822 863 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 MESDQ14696 234 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 ZNF528Q3MIS6 628 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 PPP6R3Q5H9R7 873 aaPredicted RBP12.81□□□□□ -0.36
SKA1-203ENST00000417656 SDE2Q6IQ49 451 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 RTL3Q8N8U3 475 aaKnown RBP12.81□□□□□ -0.36
SKA1-203ENST00000417656 MDGA1Q8NFP4 955 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 OR7D4Q8NG98 312 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 MYO19Q96H55 970 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 MRGPRX3Q96LB0 322 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 PSMB7Q99436 277 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 FEM1AQ9BSK4 669 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 DESI2Q9BSY9 194 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 LUC7LQ9NQ29 371 aaKnown RBP12.81□□□□□ -0.36
SKA1-203ENST00000417656 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.81□□□□□ -0.36
SKA1-203ENST00000417656 NDFIP2Q9NV92 336 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 KLHL11Q9NVR0 708 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 TMEM248Q9NWD8 314 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 DNAI1Q9UI46 699 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 ERVW-1Q9UQF0 538 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 OR51B4Q9Y5P0 310 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 CHD5Q8TDI0 1954 aa12.81□□□□□ -0.36
SKA1-203ENST00000417656 A0A0D9SEW6 157 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 RCCD1A6NED2 376 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 NPC1O15118 1278 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 SNAP91O60641 907 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 EPHX1P07099 455 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 RARAP10276 462 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms