RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 PPP1R13BQ96KQ4 1090 aa16.1■□□□□ 0.17
RHBDF1-202ENST00000417043 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.1■□□□□ 0.17
RHBDF1-202ENST00000417043 DDIT4Q9NX09 232 aa16.1■□□□□ 0.17
RHBDF1-202ENST00000417043 KIAA1468Q9P260 1216 aa16.1■□□□□ 0.17
RHBDF1-202ENST00000417043 APEX2Q9UBZ4 518 aa16.1■□□□□ 0.17
RHBDF1-202ENST00000417043 SCML1Q9UN30 329 aa16.1■□□□□ 0.17
RHBDF1-202ENST00000417043 PCDHGB2Q9Y5G2 931 aa16.1■□□□□ 0.17
RHBDF1-202ENST00000417043 EDDM13A0A1B0GTR0 161 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 CDK17Q00537 523 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 MEA1Q16626 185 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 EXOC3L4Q17RC7 722 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 CCDC157Q569K6 752 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 RNF219Q5W0B1 726 aaPredicted RBP16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 OR6B2Q6IFH4 312 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 FBXL22Q6P050 247 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 GBP6Q6ZN66 633 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 FAM183BPQ6ZVS7 135 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 KDM1BQ8NB78 822 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 C1orf131Q8NDD1 294 aaKnown RBP16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 OR52K2Q8NGK3 314 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 SHC3Q92529 594 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 SLC2A13Q96QE2 648 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 TRIM62Q9BVG3 475 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 SIX2Q9NPC8 291 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 PLCB1Q9NQ66 1216 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 ITIH6Q6UXX5 1313 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 LAMA5O15230 3695 aa16.09■□□□□ 0.17
RHBDF1-202ENST00000417043 FOXN3O00409 490 aaPredicted RBP16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 IL1BP01584 269 aa16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 ERBB2P04626 1255 aa16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 ABCB4P21439 1286 aa16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 RACK1P63244 317 aaKnown RBP16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 NME3Q13232 169 aa16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 SUZ12Q15022 739 aaKnown RBP16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 CXorf57Q6NSI4 855 aaKnown RBP16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 C14orf80Q86SX3 495 aa16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 GATAD2AQ86YP4 633 aa16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 OR14C36Q8NHC7 312 aa16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 MDM1Q8TC05 714 aa16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 CDC6Q99741 560 aa16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 ADAMTS1Q9UHI8 967 aa16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 SLC12A6Q9UHW9 1150 aa16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 DNAJC12Q9UKB3 198 aa16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 VANGL2Q9ULK5 521 aa16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 KNTC1P50748 2209 aa16.08■□□□□ 0.16
RHBDF1-202ENST00000417043 ACACAQ13085 2346 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 LRRC72A6NJI9 287 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 HOXB3P14651 431 aaPredicted RBP16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 GOT1P17174 413 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 CCR1P32246 355 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 CLCN1P35523 988 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 MTIF2P46199 727 aaKnown RBP16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 CCT8P50990 548 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 C21orf59P57076 290 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 AUHQ13825 339 aaKnown RBP16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 POM121L1PQ3SYA9 428 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 EFHC1Q5JVL4 640 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 OLFML1Q6UWY5 402 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 SND1Q7KZF4 910 aaKnown RBP eCLIP16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 SLC47A2Q86VL8 602 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 PROSER1Q86XN7 944 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 OR2T34Q8NGX1 318 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 ALG14Q96F25 216 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 RPRD1AQ96P16 312 aaPredicted RBP16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 ACE2Q9BYF1 805 aaPredicted RBP16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 SIK2Q9H0K1 926 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 AASDHPPTQ9NRN7 309 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 SARDHQ9UL12 918 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 FZD4Q9ULV1 537 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 PCDHGC3Q9UN70 934 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 APC2O95996 2303 aa16.07■□□□□ 0.16
RHBDF1-202ENST00000417043 TBC1D3DA0A087WVF3 549 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 TBC1D3IA0A087WXS9 549 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 TBC1D3EA0A087X179 549 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 TBC1D3KA0A087X1G2 549 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 A0A1B0GVM2 712 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 FAM149AA5PLN7 773 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 TBC1D3FA6NER0 549 aaPredicted RBP16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 TCAF2A6NFQ2 919 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 C10orf142B7Z368 130 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 TBC1D3LB9A6J9 549 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 VILLO15195 856 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 PCDHGA12O60330 932 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 HSF2BPO75031 334 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 RTN2O75298 545 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 DKK1O94907 266 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 GLI1P08151 1106 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 TBC1D3HP0C7X1 549 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 SLC2A3P11169 496 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 TFE3P19532 575 aaPredicted RBP16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 C5AR1P21730 350 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 DRD3P35462 400 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 NNMTP40261 264 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 PLK1P53350 603 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 ADPRHP54922 357 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 PPP2CBP62714 309 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 PPP2CAP67775 309 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 PTK2Q05397 1052 aa16.06■□□□□ 0.16
RHBDF1-202ENST00000417043 SFSWAPQ12872 951 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms