RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 HS3ST4Q9Y661 456 aa14.05□□□□□ -0.16
CPNE1-209ENST00000415920 GOLGA6L7A0A1B0GV03 622 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 LRRD1A4D1F6 860 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 SLC9A3R1O14745 358 aaPredicted RBP14.04□□□□□ -0.16
CPNE1-209ENST00000415920 CREB3O43889 395 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 TSPAN3O60637 253 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 TACR2P21452 398 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 MSNP26038 577 aaKnown RBP14.04□□□□□ -0.16
CPNE1-209ENST00000415920 SLC6A4P31645 630 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 MPLP40238 635 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 LIMK1P53667 647 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 MTA1Q13330 715 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 CA9Q16790 459 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 PLK5Q496M5 336 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 FAM133BQ5BKY9 247 aaKnown RBP14.04□□□□□ -0.16
CPNE1-209ENST00000415920 ZNF569Q5MCW4 686 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 ERMARDQ5T6L9 678 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 IL31Q6EBC2 164 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 NADSYN1Q6IA69 706 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 HTR3DQ70Z44 454 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 NT5DC3Q86UY8 548 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 LGI2Q8N0V4 545 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 PYROXD2Q8N2H3 581 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 C12orf50Q8NA57 414 aaPredicted RBP14.04□□□□□ -0.16
CPNE1-209ENST00000415920 RPLP0P6Q8NHW5 317 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 OSCP1Q8WVF1 389 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 TEKT4Q8WW24 435 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 KRT35Q92764 455 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 BHMTQ93088 406 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 PRICKLE1Q96MT3 831 aaPredicted RBP14.04□□□□□ -0.16
CPNE1-209ENST00000415920 P2RY13Q9BPV8 354 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 DDX50Q9BQ39 737 aaKnown RBP14.04□□□□□ -0.16
CPNE1-209ENST00000415920 DUSP15Q9H1R2 295 aaPredicted RBP14.04□□□□□ -0.16
CPNE1-209ENST00000415920 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.04□□□□□ -0.16
CPNE1-209ENST00000415920 AMFRQ9UKV5 643 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 VANGL2Q9ULK5 521 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 INVSQ9Y283 1065 aa14.04□□□□□ -0.16
CPNE1-209ENST00000415920 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.04□□□□□ -0.16
CPNE1-209ENST00000415920 CCDC163A0A0D9SF12 145 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 TYW5A2RUC4 315 aaKnown RBP14.03□□□□□ -0.16
CPNE1-209ENST00000415920 E9PAM4 449 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 NFATC1O95644 943 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 RARAP10276 462 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 CTNNA1P35221 906 aaKnown RBP14.03□□□□□ -0.16
CPNE1-209ENST00000415920 CDH6P55285 790 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 TPI1P60174 286 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 RABGAP1LQ5R372 815 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 ADGRF1Q5T601 910 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 TPGS1Q6ZTW0 290 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 POLNQ7Z5Q5 900 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 CIR1Q86X95 450 aaPredicted RBP14.03□□□□□ -0.16
CPNE1-209ENST00000415920 CCDC50Q8IVM0 306 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 SLC35F6Q8N357 371 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 ATP2A3Q93084 1043 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 OTUB2Q96DC9 234 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 LOXL4Q96JB6 756 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 ZC3H10Q96K80 434 aaKnown RBP14.03□□□□□ -0.16
CPNE1-209ENST00000415920 RPRD1AQ96P16 312 aaPredicted RBP14.03□□□□□ -0.16
CPNE1-209ENST00000415920 HAPLN3Q96S86 360 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 KCTD15Q96SI1 283 aaPredicted RBP14.03□□□□□ -0.16
CPNE1-209ENST00000415920 EPAS1Q99814 870 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 LINC00597Q9H2U6 94 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 ECT2Q9H8V3 914 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 ABCA7Q8IZY2 2146 aa14.03□□□□□ -0.16
CPNE1-209ENST00000415920 CCDC66A2RUB6 948 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 MIF4GDA9UHW6 222 aaKnown RBP14.02□□□□□ -0.17
CPNE1-209ENST00000415920 NEDD8-MDP1E9PL57 170 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 GIPC1O14908 333 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 SRGAP2O75044 1071 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 ADH1CP00326 375 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 CYBBP04839 570 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 CYP17A1P05093 508 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 CTNNA2P26232 953 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 CHKAP35790 457 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 ARL4AP40617 200 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 SGSHP51688 502 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 GNG11P61952 73 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 AUHQ13825 339 aaKnown RBP14.02□□□□□ -0.17
CPNE1-209ENST00000415920 PDGFRLQ15198 375 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 DPYSL2Q16555 572 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 ANO4Q32M45 955 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 EML3Q32P44 896 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 ATP13A4Q4VNC1 1196 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 RWDD4Q6NW29 188 aaKnown RBP14.02□□□□□ -0.17
CPNE1-209ENST00000415920 ZSCAN30Q86W11 494 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 FAM217AQ8IXS0 508 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 CPXM2Q8N436 756 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 CPA6Q8N4T0 437 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 UBL4BQ8N7F7 174 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 HJURPQ8NCD3 748 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-209ENST00000415920 CD101Q93033 1021 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 TBC1D31Q96DN5 1066 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 C16orf45Q96MC5 204 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-209ENST00000415920 CALN1Q9BXU9 219 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 MAGEB5Q9BZ81 275 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 KCND1Q9NSA2 647 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 DDX56Q9NY93 547 aaKnown RBP14.02□□□□□ -0.17
CPNE1-209ENST00000415920 OR12D3Q9UGF7 316 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 STOML2Q9UJZ1 356 aa14.02□□□□□ -0.17
CPNE1-209ENST00000415920 CFAP47Q6ZTR5 3102 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms