RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 AUHQ13825 339 aaKnown RBP14.94□□□□□ -0.02
SGCE-202ENST00000415788 PIK3R6Q5UE93 754 aa14.94□□□□□ -0.02
SGCE-202ENST00000415788 TTC39BQ5VTQ0 682 aaPredicted RBP14.94□□□□□ -0.02
SGCE-202ENST00000415788 DAB2IPQ5VWQ8 1189 aa14.94□□□□□ -0.02
SGCE-202ENST00000415788 NADSYN1Q6IA69 706 aa14.94□□□□□ -0.02
SGCE-202ENST00000415788 CYP4V2Q6ZWL3 525 aaPredicted RBP14.94□□□□□ -0.02
SGCE-202ENST00000415788 CPA6Q8N4T0 437 aa14.94□□□□□ -0.02
SGCE-202ENST00000415788 ASIC4Q96FT7 647 aa14.94□□□□□ -0.02
SGCE-202ENST00000415788 PRMT1Q99873 361 aaKnown RBP14.94□□□□□ -0.02
SGCE-202ENST00000415788 LINC00597Q9H2U6 94 aa14.94□□□□□ -0.02
SGCE-202ENST00000415788 ZWILCHQ9H900 591 aa14.94□□□□□ -0.02
SGCE-202ENST00000415788 SPHK2Q9NRA0 654 aa14.94□□□□□ -0.02
SGCE-202ENST00000415788 OR12D3Q9UGF7 316 aa14.94□□□□□ -0.02
SGCE-202ENST00000415788 GFRA2O00451 464 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 FTCDO95954 541 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 RARAP10276 462 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 TCF4P15884 667 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 SLC8A1P32418 973 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 HLTFQ14527 1009 aaKnown RBP eCLIP14.93□□□□□ -0.02
SGCE-202ENST00000415788 DPYSL2Q16555 572 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 MPPE1Q53F39 396 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 RABGAP1LQ5R372 815 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 MPP7Q5T2T1 576 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 RAP1GAP2Q684P5 730 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 PEX26Q7Z412 305 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 PARP9Q8IXQ6 854 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 CACNA2D3Q8IZS8 1091 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 GJD3Q8N144 294 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 DNASE1L2Q92874 299 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 SGSM3Q96HU1 749 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 ZFYVE19Q96K21 471 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 EPAS1Q99814 870 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 SIK2Q9H0K1 926 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 GOLPH3Q9H4A6 298 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 EBF3Q9H4W6 596 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 CNOT10Q9H9A5 744 aaKnown RBP14.93□□□□□ -0.02
SGCE-202ENST00000415788 PPANQ9NQ55 473 aaKnown RBP14.93□□□□□ -0.02
SGCE-202ENST00000415788 MARK1Q9P0L2 795 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 AMFRQ9UKV5 643 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 SORCS3Q9UPU3 1222 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 MIF4GDA9UHW6 222 aaKnown RBP14.93□□□□□ -0.02
SGCE-202ENST00000415788 ARNTLO00327 626 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 SRFP11831 508 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 SLC6A4P31645 630 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 HPDP32754 393 aaPredicted RBP14.93□□□□□ -0.02
SGCE-202ENST00000415788 CTNNA1P35221 906 aaKnown RBP14.93□□□□□ -0.02
SGCE-202ENST00000415788 TAS2R40P59535 323 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 RUNX3Q13761 415 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 DHCR24Q15392 516 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 ANKRD20A8PQ5CZ79 823 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 NT5DC3Q86UY8 548 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 HJURPQ8NCD3 748 aaPredicted RBP14.93□□□□□ -0.02
SGCE-202ENST00000415788 CSGALNACT1Q8TDX6 532 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 TMA16Q96EY4 203 aaKnown RBP14.93□□□□□ -0.02
SGCE-202ENST00000415788 KDM4CQ9H3R0 1056 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 DHX35Q9H5Z1 703 aaKnown RBP14.93□□□□□ -0.02
SGCE-202ENST00000415788 RETREG1Q9H6L5 497 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 ECT2Q9H8V3 914 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 CD248Q9HCU0 757 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 HPS4Q9NQG7 708 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 SLC2A4RGQ9NR83 387 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 TMPRSS4Q9NRS4 437 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.93□□□□□ -0.02
SGCE-202ENST00000415788 DDX56Q9NY93 547 aaKnown RBP14.93□□□□□ -0.02
SGCE-202ENST00000415788 PPARGC1AQ9UBK2 798 aaKnown RBP14.93□□□□□ -0.02
SGCE-202ENST00000415788 DUSP12Q9UNI6 340 aa14.93□□□□□ -0.02
SGCE-202ENST00000415788 EYSQ5T1H1 3165 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 CYP17A1P05093 508 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 ECHS1P30084 290 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 GAD2Q05329 585 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 ZNF844Q08AG5 666 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 XRCC4Q13426 336 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 PDK2Q15119 407 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 SMTNL2Q2TAL5 461 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 ITPRIPL2Q3MIP1 535 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 C5orf22Q49AR2 442 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 KCNT1Q5JUK3 1230 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 LY6G5CQ5SRR4 150 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 TRIM68Q6AZZ1 485 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 FBXL22Q6P050 247 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 CYB5D1Q6P9G0 228 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 CPNE8Q86YQ8 564 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 MAP7D3Q8IWC1 876 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 LGI2Q8N0V4 545 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 ZNF557Q8N988 423 aaPredicted RBP14.92□□□□□ -0.02
SGCE-202ENST00000415788 HSPH1Q92598 858 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 CD101Q93033 1021 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 CENPTQ96BT3 561 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 SEC16BQ96JE7 1060 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 RPRD1AQ96P16 312 aaPredicted RBP14.92□□□□□ -0.02
SGCE-202ENST00000415788 RCOR3Q9P2K3 495 aaPredicted RBP14.92□□□□□ -0.02
SGCE-202ENST00000415788 XIRP2A4UGR9 3374 aa14.92□□□□□ -0.02
SGCE-202ENST00000415788 IGLV3-10A0A075B6K4 115 aa14.91□□□□□ -0.02
SGCE-202ENST00000415788 E9PAM4 449 aa14.91□□□□□ -0.02
SGCE-202ENST00000415788 HOXC11O43248 304 aaPredicted RBP14.91□□□□□ -0.02
SGCE-202ENST00000415788 DNAJC8O75937 253 aaPredicted RBP14.91□□□□□ -0.02
SGCE-202ENST00000415788 PENKP01210 267 aaPredicted RBP14.91□□□□□ -0.02
SGCE-202ENST00000415788 ARSAP15289 507 aa14.91□□□□□ -0.02
SGCE-202ENST00000415788 EZRP15311 586 aaKnown RBP14.91□□□□□ -0.02
SGCE-202ENST00000415788 CTNNA2P26232 953 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms