RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 CYP26A1O43174 497 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 NUDT21O43809 227 aaKnown RBP6.35□□□□□ -1.39
LMBR1-204ENST00000415428 KLHL41O60662 606 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 NMT1P30419 496 aaKnown RBP6.35□□□□□ -1.39
LMBR1-204ENST00000415428 PGFP49763 221 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 NDST2P52849 883 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 DNAJC3Q13217 504 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 PTK2BQ14289 1009 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 LACTB2Q53H82 288 aaPredicted RBP6.35□□□□□ -1.39
LMBR1-204ENST00000415428 C1orf220Q5T0J3 134 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 BMFQ96LC9 184 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 NEUROG2Q9H2A3 272 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 KBTBD4Q9NVX7 518 aa6.35□□□□□ -1.39
LMBR1-204ENST00000415428 BLACEA4D250 179 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 PLD2O14939 933 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 RALAP11233 206 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 RARGP13631 454 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 SLC5A2P31639 672 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 CSNK1DP48730 415 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 ARSDP51689 593 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 LY6DQ14210 128 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 E2F4Q16254 413 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 MBLAC2Q68D91 279 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 PARGQ86W56 976 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 BPHLQ86WA6 291 aaPredicted RBP6.34□□□□□ -1.39
LMBR1-204ENST00000415428 UNC45BQ8IWX7 931 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 ZSCAN31Q96LW9 406 aaPredicted RBP6.34□□□□□ -1.39
LMBR1-204ENST00000415428 LRRC27Q9C0I9 530 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 STRADBQ9C0K7 418 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 DNAI2Q9GZS0 605 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 TNMDQ9H2S6 317 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 CNGB3Q9NQW8 809 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 PDRG1Q9NUG6 133 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 SIDT1Q9NXL6 827 aaKnown RBP6.34□□□□□ -1.39
LMBR1-204ENST00000415428 NEDD8-MDP1E9PL57 170 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 HNRNPDLO14979 420 aaKnown RBP6.34□□□□□ -1.39
LMBR1-204ENST00000415428 CYBBP04839 570 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 SLC20A2Q08357 652 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 MDH1BQ5I0G3 518 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 NUGGCQ68CJ6 796 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 NCEH1Q6PIU2 408 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 DSG4Q86SJ6 1040 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 OR4D9Q8NGE8 314 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 NINJ1Q92982 152 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 HAPLN3Q96S86 360 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 C7orf25Q9BPX7 421 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 KCTD5Q9NXV2 234 aa6.34□□□□□ -1.39
LMBR1-204ENST00000415428 ZFR2Q9UPR6 939 aaKnown RBP6.34□□□□□ -1.39
LMBR1-204ENST00000415428 FAM149AA5PLN7 773 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 CCDC169A6NNP5 214 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 TGFB1I1O43294 461 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 GOSR1O95249 250 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 GLI1P08151 1106 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 GRIK1P39086 918 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 TAF12Q16514 161 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 MS4A13Q5J8X5 152 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 WDR74Q6RFH5 385 aaPredicted RBP6.34□□□□□ -1.4
LMBR1-204ENST00000415428 DTHD1Q6ZMT9 781 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 C14orf80Q86SX3 495 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 TP53I13Q8NBR0 393 aaPredicted RBP6.34□□□□□ -1.4
LMBR1-204ENST00000415428 CASKIN2Q8WXE0 1202 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 LRFN5Q96NI6 719 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 TRIM9Q9C026 710 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 TRPC7Q9HCX4 862 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 PRDM8Q9NQV8 689 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 SERGEFQ9UGK8 458 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 RAD54BQ9Y620 910 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 AK5Q9Y6K8 562 aa6.34□□□□□ -1.4
LMBR1-204ENST00000415428 SSU72P8A0A1W2PR75 194 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 KLK10O43240 276 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 TSPAN6O43657 245 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 ATP2C2O75185 946 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 ZNF821O75541 412 aaPredicted RBP6.33□□□□□ -1.4
LMBR1-204ENST00000415428 GSRP00390 522 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 TNNC2P02585 160 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 MYL1P05976 194 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 CDC20Q12834 499 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 INAQ16352 499 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 ME3Q16798 604 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 CERCAMQ5T4B2 595 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 ATCAYQ86WG3 371 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 ZNF397Q8NF99 534 aaPredicted RBP6.33□□□□□ -1.4
LMBR1-204ENST00000415428 C9orf43Q8TAL5 461 aaPredicted RBP6.33□□□□□ -1.4
LMBR1-204ENST00000415428 NT5C3BQ969T7 300 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 SLC6A17Q9H1V8 727 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 SHANK1Q9Y566 2161 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 NCOA6Q14686 2063 aaPredicted RBP6.33□□□□□ -1.4
LMBR1-204ENST00000415428 SDK2Q58EX2 2172 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 RNASEH1O60930 286 aaKnown RBP6.33□□□□□ -1.4
LMBR1-204ENST00000415428 FBXO21O94952 628 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 C9P02748 559 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 WT1P19544 449 aaPredicted RBP6.33□□□□□ -1.4
LMBR1-204ENST00000415428 SGSM1Q2NKQ1 1148 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 NADSYN1Q6IA69 706 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 LYSMD3Q7Z3D4 306 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 TMEM130Q8N3G9 435 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 CSGALNACT2Q8N6G5 542 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 ATL2Q8NHH9 583 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 C1orf74Q96LT6 269 aa6.33□□□□□ -1.4
LMBR1-204ENST00000415428 PPP1R9BQ96SB3 815 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms