RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 TAF4O00268 1085 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 IVLP07476 585 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 POU2F2P09086 479 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 ODC1P11926 461 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 LCP1P13796 627 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 PECAM1P16284 738 aaPredicted RBP17.65■□□□□ 0.42
PTPRC-206ENST00000413409 CEBPBP17676 345 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 PCSK1P29120 753 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 IRAK1P51617 712 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 CLCNKBP51801 687 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 CDR1P51861 262 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 EIF3EP60228 445 aaKnown RBP17.65■□□□□ 0.42
PTPRC-206ENST00000413409 ATP11AP98196 1134 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 ROR1Q01973 937 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 FOXC1Q12948 553 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 UPP1Q16831 310 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 SLC9A4Q6AI14 798 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 DSTYKQ6XUX3 929 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 GLIS1Q8NBF1 620 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.65■□□□□ 0.42
PTPRC-206ENST00000413409 TMEM121Q9BTD3 319 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 BRD9Q9H8M2 597 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 SLC12A6Q9UHW9 1150 aa17.65■□□□□ 0.42
PTPRC-206ENST00000413409 FARP1Q9Y4F1 1045 aaPredicted RBP17.65■□□□□ 0.42
PTPRC-206ENST00000413409 HELZ2Q9BYK8 2649 aaKnown RBP17.64■□□□□ 0.41
PTPRC-206ENST00000413409 APOL1O14791 398 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 RGS16O15492 202 aaPredicted RBP17.64■□□□□ 0.41
PTPRC-206ENST00000413409 PAPSS2O95340 614 aaPredicted RBP17.64■□□□□ 0.41
PTPRC-206ENST00000413409 CYP11A1P05108 521 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 ZFXP17010 805 aaPredicted RBP17.64■□□□□ 0.41
PTPRC-206ENST00000413409 MATKP42679 507 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 ADIGQ0VDE8 80 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 DNAJC21Q5F1R6 531 aaKnown RBP17.64■□□□□ 0.41
PTPRC-206ENST00000413409 TNFAIP8L3Q5GJ75 292 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 MDH1BQ5I0G3 518 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 CLEC20AQ6ZU45 233 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 PAQR9Q6ZVX9 377 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 FAM35AQ86V20 835 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 CLEC4CQ8WTT0 213 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 PRCCQ92733 491 aaPredicted RBP17.64■□□□□ 0.41
PTPRC-206ENST00000413409 RTP4Q96DX8 246 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 SERPINB12Q96P63 405 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 SLC2A13Q96QE2 648 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 ADAM33Q9BZ11 813 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 ZNF334Q9HCZ1 680 aaPredicted RBP17.64■□□□□ 0.41
PTPRC-206ENST00000413409 CRTAC1Q9NQ79 661 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 RCOR3Q9P2K3 495 aaPredicted RBP17.64■□□□□ 0.41
PTPRC-206ENST00000413409 DSEQ9UL01 958 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 NOVA2Q9UNW9 492 aaKnown RBP17.64■□□□□ 0.41
PTPRC-206ENST00000413409 PIAS3Q9Y6X2 628 aa17.64■□□□□ 0.41
PTPRC-206ENST00000413409 TDRD15B5MCY1 1934 aaKnown RBP17.64■□□□□ 0.41
PTPRC-206ENST00000413409 TMEM8BA6NDV4 472 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 ERICH4A6NGS2 130 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 RASGRF2O14827 1237 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 TADA2AO75478 443 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 RHOP08100 348 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 ZSCAN5DPP0CG00 497 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 RBP3P10745 1247 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 ACAT1P24752 427 aaKnown RBP17.63■□□□□ 0.41
PTPRC-206ENST00000413409 STIP1P31948 543 aaKnown RBP17.63■□□□□ 0.41
PTPRC-206ENST00000413409 MDH1P40925 334 aaKnown RBP17.63■□□□□ 0.41
PTPRC-206ENST00000413409 MAGOHP61326 146 aaKnown RBP17.63■□□□□ 0.41
PTPRC-206ENST00000413409 TUSC3Q13454 348 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 PSMD5Q16401 504 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 ZSCAN26Q16670 478 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 CCDC142Q17RM4 750 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 SLC25A52Q3SY17 297 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 RAB6CQ53S08 254 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 ANKRD20A8PQ5CZ79 823 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 FAM78AQ5JUQ0 283 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 PLA2G2CQ5R387 149 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 ERMARDQ5T6L9 678 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 SCYL2Q6P3W7 929 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 LRRC31Q6UY01 552 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 Q6ZS52 159 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 BNIPLQ7Z465 357 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 PPIL6Q8IXY8 311 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 SIX6OS1Q8N1H7 587 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 C3orf58Q8NDZ4 430 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 HASPINQ8TF76 798 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 P3H4Q92791 437 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 RBM15Q96T37 977 aaKnown RBP eCLIP17.63■□□□□ 0.41
PTPRC-206ENST00000413409 MED10Q9BTT4 135 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 RAB6CQ9H0N0 254 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 LRRC4Q9HBW1 653 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 KRT82Q9NSB4 513 aa17.63■□□□□ 0.41
PTPRC-206ENST00000413409 BCCIPQ9P287 314 aaKnown RBP eCLIP17.63■□□□□ 0.41
PTPRC-206ENST00000413409 FREM2Q5SZK8 3169 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 CASTOR2A6NHX0 329 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 ATP2C2O75185 946 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 EPN2O95208 641 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 ACSL3O95573 720 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 IFNB1P01574 187 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 ETS1P14921 441 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 IL4RP24394 825 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 ATP5DP30049 168 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 HPDP32754 393 aaPredicted RBP17.62■□□□□ 0.41
PTPRC-206ENST00000413409 MAGEA4P43358 317 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 ATP1A2P50993 1020 aa17.62■□□□□ 0.41
PTPRC-206ENST00000413409 NOVA1P51513 510 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms