RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SLC26A2P50443 739 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 MYBPC1Q00872 1141 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 CYLC2Q14093 348 aaPredicted RBP18.02■□□□□ 0.47
SDCBP-202ENST00000413219 RFTN1Q14699 578 aaPredicted RBP18.02■□□□□ 0.47
SDCBP-202ENST00000413219 LY6KQ17RY6 165 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 EFCAB12Q6NXP0 572 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 TRIM50Q86XT4 487 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 PSTKQ8IV42 348 aaKnown RBP18.02■□□□□ 0.47
SDCBP-202ENST00000413219 TNS4Q8IZW8 715 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 PLD6Q8N2A8 252 aaKnown RBP18.02■□□□□ 0.47
SDCBP-202ENST00000413219 METTL25Q8N6Q8 603 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 RDH11Q8TC12 318 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 KBTBD7Q8WVZ9 684 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 CDRT15Q96T59 188 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 LGMNQ99538 433 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 ZNF385DQ9H6B1 395 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 LRRC40Q9H9A6 602 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 GMEB1Q9Y692 573 aa18.02■□□□□ 0.47
SDCBP-202ENST00000413219 PYGLP06737 847 aa18.01■□□□□ 0.47
SDCBP-202ENST00000413219 FAM58BPP0C7Q3 252 aa18.01■□□□□ 0.47
SDCBP-202ENST00000413219 SERPINB5P36952 375 aa18.01■□□□□ 0.47
SDCBP-202ENST00000413219 MLH1P40692 756 aa18.01■□□□□ 0.47
SDCBP-202ENST00000413219 MRPS22P82650 360 aaKnown RBP18.01■□□□□ 0.47
SDCBP-202ENST00000413219 AMHR2Q16671 573 aa18.01■□□□□ 0.47
SDCBP-202ENST00000413219 STRADAQ7RTN6 431 aa18.01■□□□□ 0.47
SDCBP-202ENST00000413219 IFNLR1Q8IU57 520 aaPredicted RBP18.01■□□□□ 0.47
SDCBP-202ENST00000413219 ITFG2Q969R8 447 aa18.01■□□□□ 0.47
SDCBP-202ENST00000413219 PGBD4Q96DM1 585 aa18.01■□□□□ 0.47
SDCBP-202ENST00000413219 P2RY11Q96G91 374 aa18.01■□□□□ 0.47
SDCBP-202ENST00000413219 GATA5Q9BWX5 397 aaPredicted RBP18.01■□□□□ 0.47
SDCBP-202ENST00000413219 OXSMQ9NWU1 459 aa18.01■□□□□ 0.47
SDCBP-202ENST00000413219 HSFX1Q9UBD0 423 aa18.01■□□□□ 0.47
SDCBP-202ENST00000413219 A0A096LPK6 155 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 SLCO1B7G3V0H7 640 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 HBP1O60381 514 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 GOT1P17174 413 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 XRCC1P18887 633 aaPredicted RBP18■□□□□ 0.47
SDCBP-202ENST00000413219 PSMB4P28070 264 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 PPARGP37231 505 aaPredicted RBP18■□□□□ 0.47
SDCBP-202ENST00000413219 CLCN3P51790 818 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 NR1H2P55055 460 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 PDK1Q15118 436 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 FSTL4Q6MZW2 842 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 KLC3Q6P597 504 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 STRA8Q7Z7C7 330 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 CCDC185Q8N715 623 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 SERBP1Q8NC51 408 aaKnown RBP eCLIP18■□□□□ 0.47
SDCBP-202ENST00000413219 B3GNT5Q9BYG0 378 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 DRC3Q9H069 523 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 NMRAL1Q9HBL8 299 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 VTI1BQ9UEU0 232 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 MFHAS1Q9Y4C4 1052 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 F5H423 210 aaPredicted RBP18■□□□□ 0.47
SDCBP-202ENST00000413219 H0YJX3 145 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 NOP56O00567 594 aaKnown RBP18■□□□□ 0.47
SDCBP-202ENST00000413219 MFSD11O43934 449 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 BCAS2O75934 225 aaPredicted RBP18■□□□□ 0.47
SDCBP-202ENST00000413219 ME2P23368 584 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 RPS12P25398 132 aaKnown RBP18■□□□□ 0.47
SDCBP-202ENST00000413219 RPL14P50914 215 aaKnown RBP18■□□□□ 0.47
SDCBP-202ENST00000413219 ATXN1P54253 815 aaKnown RBP18■□□□□ 0.47
SDCBP-202ENST00000413219 CSE1LP55060 971 aaKnown RBP18■□□□□ 0.47
SDCBP-202ENST00000413219 MYLK3Q32MK0 819 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 CELF3Q5SZQ8 465 aaKnown RBP18■□□□□ 0.47
SDCBP-202ENST00000413219 BSPRYQ5W0U4 402 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 SEL1L3Q68CR1 1132 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 ARHGAP17Q68EM7 881 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 ACOT1Q86TX2 421 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 RIOX2Q8IUF8 465 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 ZFP28Q8NHY6 868 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 TRAPPC12Q8WVT3 735 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 FCRL3Q96P31 734 aaPredicted RBP18■□□□□ 0.47
SDCBP-202ENST00000413219 SLC2A11Q9BYW1 496 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 MAGEB5Q9BZ81 275 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 PIH1D1Q9NWS0 290 aaKnown RBP18■□□□□ 0.47
SDCBP-202ENST00000413219 HACL1Q9UJ83 578 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 GNEQ9Y223 722 aaKnown RBP18■□□□□ 0.47
SDCBP-202ENST00000413219 NR2E3Q9Y5X4 410 aa18■□□□□ 0.47
SDCBP-202ENST00000413219 PTPRFP10586 1907 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.99■□□□□ 0.47
SDCBP-202ENST00000413219 TIMM44O43615 452 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 TADA2AO75478 443 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 GMPRP36959 345 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 HADHAP40939 763 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 RPL34P49207 117 aaKnown RBP17.99■□□□□ 0.47
SDCBP-202ENST00000413219 USP46P62068 366 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 HPCAP84074 193 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 LSM12Q3MHD2 195 aaKnown RBP17.99■□□□□ 0.47
SDCBP-202ENST00000413219 HSDL1Q3SXM5 330 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 TMEM135Q86UB9 458 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 ZNF410Q86VK4 478 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 URGCPQ8TCY9 931 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 JDP2Q8WYK2 163 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 MAML3Q96JK9 1138 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 CNBD2Q96M20 576 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 SENP6Q9GZR1 1112 aaPredicted RBP17.99■□□□□ 0.47
SDCBP-202ENST00000413219 FZD10Q9ULW2 581 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 INHBCP55103 352 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 IFRD2Q12894 506 aaPredicted RBP17.99■□□□□ 0.47
SDCBP-202ENST00000413219 PRKAA1Q13131 559 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms