RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 ZCCHC9Q8N567 271 aaKnown RBP11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 GOLGA6L1Q8N7Z2 621 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 ARL14EPQ8N8R7 260 aaPredicted RBP11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 NETO2Q8NC67 525 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 LRRN4Q8WUT4 740 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 CPT1BQ92523 772 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 PRCCQ92733 491 aaPredicted RBP11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 VAT1Q99536 393 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 PRMT1Q99873 361 aaKnown RBP11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 LRRC3Q9BY71 257 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 PBX4Q9BYU1 374 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 RNF38Q9H0F5 515 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 ADAM7Q9H2U9 754 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 RETREG1Q9H6L5 497 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 CERS4Q9HA82 394 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 SMPD4Q9NXE4 827 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 KLHL8Q9P2G9 620 aaPredicted RBP11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 FARP1Q9Y4F1 1045 aaPredicted RBP11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 CPQQ9Y646 472 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 PRUNE2Q8WUY3 3088 aa11.92□□□□□ -0.5
SNRNP35-202ENST00000412157 C2orf16Q68DN1 1984 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 GOLGA6L7A0A1B0GV03 622 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 A0A1W2PRU2 124 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 TYW5A2RUC4 315 aaKnown RBP11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 DRGXA6NNA5 263 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 NEBLO76041 1014 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 OLFM2O95897 454 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 EPCAMP16422 314 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 DDX6P26196 483 aaKnown RBP eCLIP11.91□□□□□ -0.51e-7■■■■■ 30.5
SNRNP35-202ENST00000412157 CHKAP35790 457 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 PBX2P40425 430 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 LMAN1P49257 510 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 NRLP54845 237 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 CAMK1Q14012 370 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 HIF1AQ16665 826 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 ANO4Q32M45 955 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 DENND2CQ68D51 928 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 GAREM2Q75VX8 874 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 TRMT10CQ7L0Y3 403 aaKnown RBP11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 TFAP2DQ7Z6R9 452 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 NLRP14Q86W24 1093 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 ZNF354CQ86Y25 554 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 LRRC49Q8IUZ0 686 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 ARHGAP12Q8IWW6 846 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 TP53INP2Q8IXH6 220 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 UMODL1-AS1Q8N2C9 162 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 MAB21L3Q8N8X9 362 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 NAT8LQ8N9F0 302 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 DEPDC1BQ8WUY9 529 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 ARNTL2Q8WYA1 636 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 IGSF8Q969P0 613 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 EXOC4Q96A65 974 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 FRMD8Q9BZ67 464 aaPredicted RBP11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 TXLNGYQ9BZA5 131 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 PHACTR1Q9C0D0 580 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 SLC39A8Q9C0K1 460 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 SLC28A3Q9HAS3 691 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 GKN1Q9NS71 199 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 ZDHHC7Q9NXF8 308 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 TRHDEQ9UKU6 1024 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 PLAAQ9Y263 795 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 SH3BP1Q9Y3L3 701 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 NOTCH4Q99466 2003 aa11.91□□□□□ -0.5
SNRNP35-202ENST00000412157 KCNK1O00180 336 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 TP73O15350 636 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 EIF3HO15372 352 aaKnown RBP eCLIP11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 OPA1O60313 960 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 RFPL2O75678 378 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 POU2F2P09086 479 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 CCNCP24863 283 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 PTPN3P26045 913 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 EPHA5P54756 1037 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 CDH4P55283 916 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 SLC7A9P82251 487 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 SARNPP82979 210 aaKnown RBP11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 IFFO1Q0D2I5 559 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 KCNJ11Q14654 390 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 C5orf22Q49AR2 442 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 ALFQ53S48 1182 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 FAM133BQ5BKY9 247 aaKnown RBP11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 ADGRF1Q5T601 910 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 GPR158Q5T848 1215 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 FAXCQ5TGI0 409 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 TTC39BQ5VTQ0 682 aaPredicted RBP11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 AFMIDQ63HM1 303 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 LRIG3Q6UXM1 1119 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 PID1Q7Z2X4 250 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 GDPD5Q8WTR4 605 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 NSMCE1Q8WV22 266 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 PPP2R3CQ969Q6 453 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 TTC25Q96NG3 672 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 ZIM3Q96PE6 472 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 TSGA13Q96PP4 275 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 RBM15Q96T37 977 aaKnown RBP eCLIP11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 PABPC3Q9H361 631 aaKnown RBP11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 CDC42EP4Q9H3Q1 356 aaKnown RBP11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 TLE6Q9H808 572 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 SP110Q9HB58 689 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 PIDD1Q9HB75 910 aa11.9□□□□□ -0.5
SNRNP35-202ENST00000412157 ETNK1Q9HBU6 452 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms