RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 FAM47DPA6NHR8 397 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 VILLO15195 856 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 MID1O15344 667 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 PCDHGA12O60330 932 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 CLDN11O75508 207 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 RNASEH2AO75792 299 aaKnown RBP14.96□□□□□ -0.01
MCF2L-210ENST00000409954 IGHV4-34P06331 123 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 CTSOP43234 321 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-210ENST00000409954 C21orf59P57076 290 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 PITX1P78337 314 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-210ENST00000409954 AUHQ13825 339 aaKnown RBP14.96□□□□□ -0.01
MCF2L-210ENST00000409954 ELAVL3Q14576 367 aaKnown RBP14.96□□□□□ -0.01
MCF2L-210ENST00000409954 CACNA1EQ15878 2313 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 FAM46CQ5VWP2 391 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 DSG4Q86SJ6 1040 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 TMEM35BQ8NCS4 154 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 RPRD1AQ96P16 312 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-210ENST00000409954 SPAG5Q96R06 1193 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 TUBGCP2Q9BSJ2 902 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 ACE2Q9BYF1 805 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-210ENST00000409954 KDM4CQ9H3R0 1056 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 CLSTN2Q9H4D0 955 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 WDCPQ9H6R7 721 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 SIX2Q9NPC8 291 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 FNDC3AQ9Y2H6 1198 aaKnown RBP14.96□□□□□ -0.01
MCF2L-210ENST00000409954 PCDH15Q96QU1 1955 aa14.96□□□□□ -0.01
MCF2L-210ENST00000409954 LAMA1P25391 3075 aa14.96□□□□□ -0.02
MCF2L-210ENST00000409954 CEP295Q9C0D2 2601 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 SYNJ2BP-COX16A0A087WUM0 186 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 M0QYT0 321 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 IL1BP01584 269 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 PDGFRAP16234 1089 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 MZF1P28698 734 aaPredicted RBP14.95□□□□□ -0.02
MCF2L-210ENST00000409954 APBA1Q02410 837 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 NME3Q13232 169 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 C5orf22Q49AR2 442 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 BRMS1LQ5PSV4 323 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 NCEH1Q6PIU2 408 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 OLFML1Q6UWY5 402 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 FAM183BPQ6ZVS7 135 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 SLC47A2Q86VL8 602 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 PASD1Q8IV76 773 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 STK40Q8N2I9 435 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 C18orf8Q96DM3 657 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 C1orf74Q96LT6 269 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 ORAI3Q9BRQ5 295 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 FEM1AQ9BSK4 669 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.95□□□□□ -0.02
MCF2L-210ENST00000409954 COX16Q9P0S2 106 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 STAP1Q9ULZ2 295 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 TBC1D30Q9Y2I9 924 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 CKAP5Q14008 2032 aa14.95□□□□□ -0.02
MCF2L-210ENST00000409954 TBC1D3DA0A087WVF3 549 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 TBC1D3IA0A087WXS9 549 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 TBC1D3EA0A087X179 549 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 TBC1D3KA0A087X1G2 549 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 TBC1D3FA6NER0 549 aaPredicted RBP14.94□□□□□ -0.02
MCF2L-210ENST00000409954 TBC1D3LB9A6J9 549 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 TNFSF14O43557 240 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 ATP9BO43861 1147 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 DAB1O75553 588 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 GRAP2O75791 330 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 ERBB2P04626 1255 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 TBC1D3HP0C7X1 549 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 CDH5P33151 784 aaPredicted RBP14.94□□□□□ -0.02
MCF2L-210ENST00000409954 NUDT1P36639 197 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 SCNN1AP37088 669 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 CTSKP43235 329 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 GRK6P43250 576 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 GABRB2P47870 512 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 CDH4P55283 916 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 KRT83P78385 493 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 CCDC15Q0P6D6 951 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 DRAP1Q14919 205 aaPredicted RBP14.94□□□□□ -0.02
MCF2L-210ENST00000409954 ACCSLQ4AC99 568 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 SLC45A4Q5BKX6 768 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 TBC1D3GQ6DHY5 549 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 TBC1D3CQ6IPX1 549 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.94□□□□□ -0.02
MCF2L-210ENST00000409954 CCNI2Q6ZMN8 369 aaPredicted RBP14.94□□□□□ -0.02
MCF2L-210ENST00000409954 SLCO6A1Q86UG4 719 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 ERICH1Q86X53 443 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 TBC1D3Q8IZP1 549 aaPredicted RBP14.94□□□□□ -0.02
MCF2L-210ENST00000409954 PNPLA1Q8N8W4 532 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 OR14C36Q8NHC7 312 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 BAHD1Q8TBE0 780 aaPredicted RBP14.94□□□□□ -0.02
MCF2L-210ENST00000409954 FRS2Q8WU20 508 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 OR8D1Q8WZ84 308 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 NT5C3BQ969T7 300 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 ALG14Q96F25 216 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 PGAP3Q96FM1 320 aaPredicted RBP14.94□□□□□ -0.02
MCF2L-210ENST00000409954 NPY6RQ99463 290 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 SIK2Q9H0K1 926 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 SLC25A13Q9UJS0 675 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 VANGL2Q9ULK5 521 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 FARP1Q9Y4F1 1045 aaPredicted RBP14.94□□□□□ -0.02
MCF2L-210ENST00000409954 HS3ST4Q9Y661 456 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 SLCO1B1Q9Y6L6 691 aa14.94□□□□□ -0.02
MCF2L-210ENST00000409954 C10orf142B7Z368 130 aa14.93□□□□□ -0.02
MCF2L-210ENST00000409954 KCNK3O14649 394 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms