RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 EMC1Q8N766 993 aa18.24■□□□□ 0.51
LSM5-204ENST00000409909 DNASE2BQ8WZ79 361 aa18.24■□□□□ 0.51
LSM5-204ENST00000409909 FEM1AQ9BSK4 669 aa18.24■□□□□ 0.51
LSM5-204ENST00000409909 RAB6CQ9H0N0 254 aa18.24■□□□□ 0.51
LSM5-204ENST00000409909 METTL5Q9NRN9 209 aaKnown RBP18.24■□□□□ 0.51
LSM5-204ENST00000409909 OR51B4Q9Y5P0 310 aa18.24■□□□□ 0.51
LSM5-204ENST00000409909 CACNA1EQ15878 2313 aa18.24■□□□□ 0.51
LSM5-204ENST00000409909 PCDH15Q96QU1 1955 aa18.24■□□□□ 0.51
LSM5-204ENST00000409909 ITIH6Q6UXX5 1313 aa18.23■□□□□ 0.51
LSM5-204ENST00000409909 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.23■□□□□ 0.51
LSM5-204ENST00000409909 METTL12A8MUP2 240 aa18.23■□□□□ 0.51
LSM5-204ENST00000409909 GJB6O95452 261 aa18.23■□□□□ 0.51
LSM5-204ENST00000409909 MAPK8P45983 427 aa18.23■□□□□ 0.51
LSM5-204ENST00000409909 ZBTB16Q05516 673 aa18.23■□□□□ 0.51
LSM5-204ENST00000409909 ZNF177Q13360 481 aaPredicted RBP18.23■□□□□ 0.51
LSM5-204ENST00000409909 ALFQ53S48 1182 aa18.23■□□□□ 0.51
LSM5-204ENST00000409909 WDR45BQ5MNZ6 344 aa18.23■□□□□ 0.51
LSM5-204ENST00000409909 DCAF12L1Q5VU92 463 aa18.23■□□□□ 0.51
LSM5-204ENST00000409909 ZNF776Q68DI1 518 aaPredicted RBP18.23■□□□□ 0.51
LSM5-204ENST00000409909 TRIM72Q6ZMU5 477 aa18.23■□□□□ 0.51
LSM5-204ENST00000409909 C1orf74Q96LT6 269 aa18.23■□□□□ 0.51
LSM5-204ENST00000409909 C11orf70Q9BRQ4 267 aa18.23■□□□□ 0.51
LSM5-204ENST00000409909 FUCA2Q9BTY2 467 aa18.23■□□□□ 0.51
LSM5-204ENST00000409909 RTN4Q9NQC3 1192 aaKnown RBP18.23■□□□□ 0.51
LSM5-204ENST00000409909 TBC1D30Q9Y2I9 924 aa18.23■□□□□ 0.51
LSM5-204ENST00000409909 DRGXA6NNA5 263 aa18.22■□□□□ 0.51
LSM5-204ENST00000409909 CLDN11O75508 207 aa18.22■□□□□ 0.51
LSM5-204ENST00000409909 ENDOD1O94919 500 aa18.22■□□□□ 0.51
LSM5-204ENST00000409909 DNTTP04053 509 aa18.22■□□□□ 0.51
LSM5-204ENST00000409909 VAV1P15498 845 aa18.22■□□□□ 0.51
LSM5-204ENST00000409909 ATP11AP98196 1134 aa18.22■□□□□ 0.51
LSM5-204ENST00000409909 GFPT1Q06210 699 aaPredicted RBP18.22■□□□□ 0.51
LSM5-204ENST00000409909 CLEC16AQ2KHT3 1053 aa18.22■□□□□ 0.51
LSM5-204ENST00000409909 SH3PXD2AQ5TCZ1 1133 aa18.22■□□□□ 0.51
LSM5-204ENST00000409909 DAB2IPQ5VWQ8 1189 aa18.22■□□□□ 0.51
LSM5-204ENST00000409909 RABEPKQ7Z6M1 372 aa18.22■□□□□ 0.51
LSM5-204ENST00000409909 FAM131BQ86XD5 332 aa18.22■□□□□ 0.51
LSM5-204ENST00000409909 JOSD2Q8TAC2 188 aa18.22■□□□□ 0.51
LSM5-204ENST00000409909 PTPRN2Q92932 1015 aa18.22■□□□□ 0.51
LSM5-204ENST00000409909 FAM129BQ96TA1 746 aa18.22■□□□□ 0.51
LSM5-204ENST00000409909 C6orf106Q9H6K1 298 aaPredicted RBP18.22■□□□□ 0.51
LSM5-204ENST00000409909 PAXBP1Q9Y5B6 917 aa18.22■□□□□ 0.51
LSM5-204ENST00000409909 EDDM13A0A1B0GTR0 161 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 TARSL2A2RTX5 802 aaKnown RBP18.21■□□□□ 0.51
LSM5-204ENST00000409909 SMTNL1A8MU46 457 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 MEI4A8MW99 385 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 KCNK5O95279 499 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 KCNA4P22459 653 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 RDXP35241 583 aaKnown RBP18.21■□□□□ 0.51
LSM5-204ENST00000409909 ZNF165P49910 485 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 CDH4P55283 916 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 OXCT1P55809 520 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 SULT2A1Q06520 285 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 IQCB1Q15051 598 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 C15orf59Q2T9L4 293 aaPredicted RBP18.21■□□□□ 0.51
LSM5-204ENST00000409909 UAP1L1Q3KQV9 507 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 CCDC14Q49A88 953 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 RNF219Q5W0B1 726 aaPredicted RBP18.21■□□□□ 0.51
LSM5-204ENST00000409909 PHF13Q86YI8 300 aaPredicted RBP18.21■□□□□ 0.51
LSM5-204ENST00000409909 OR2I1PQ8NGU4 316 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 C1orf216Q8TAB5 229 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 FRS2Q8WU20 508 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 RXFP2Q8WXD0 754 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 AGPAT1Q99943 283 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 PABPC3Q9H361 631 aaKnown RBP18.21■□□□□ 0.51
LSM5-204ENST00000409909 TMEM51Q9NW97 253 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 MPP6Q9NZW5 540 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 ADAM22Q9P0K1 906 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 SERGEFQ9UGK8 458 aa18.21■□□□□ 0.51
LSM5-204ENST00000409909 KNL1Q8NG31 2342 aa18.2■□□□□ 0.5
LSM5-204ENST00000409909 IGLV3-10A0A075B6K4 115 aa18.2■□□□□ 0.5
LSM5-204ENST00000409909 C2CD4BA6NLJ0 364 aa18.2■□□□□ 0.5
LSM5-204ENST00000409909 ARHGAP33O14559 1287 aa18.2■□□□□ 0.5
LSM5-204ENST00000409909 ADRB1P08588 477 aa18.2■□□□□ 0.5
LSM5-204ENST00000409909 NSFP46459 744 aaKnown RBP18.2■□□□□ 0.5
LSM5-204ENST00000409909 CST6Q15828 149 aa18.2■□□□□ 0.5
LSM5-204ENST00000409909 IRF2BP2Q7Z5L9 587 aa18.2■□□□□ 0.5
LSM5-204ENST00000409909 MMAAQ8IVH4 418 aaKnown RBP18.2■□□□□ 0.5
LSM5-204ENST00000409909 STK40Q8N2I9 435 aa18.2■□□□□ 0.5
LSM5-204ENST00000409909 BAP1Q92560 729 aa18.2■□□□□ 0.5
LSM5-204ENST00000409909 NAP1L5Q96NT1 182 aaPredicted RBP18.2■□□□□ 0.5
LSM5-204ENST00000409909 HAPLN3Q96S86 360 aa18.2■□□□□ 0.5
LSM5-204ENST00000409909 GTPBP2Q9BX10 602 aaKnown RBP18.2■□□□□ 0.5
LSM5-204ENST00000409909 BTBD1Q9H0C5 482 aa18.2■□□□□ 0.5
LSM5-204ENST00000409909 MIR1-1HGQ9H1L0 117 aa18.2■□□□□ 0.5
LSM5-204ENST00000409909 PCED1AQ9H1Q7 454 aa18.2■□□□□ 0.5
LSM5-204ENST00000409909 EIF2B4Q9UI10 523 aaKnown RBP18.2■□□□□ 0.5
LSM5-204ENST00000409909 VPS28Q9UK41 221 aa18.2■□□□□ 0.5
LSM5-204ENST00000409909 SLCO1B1Q9Y6L6 691 aa18.2■□□□□ 0.5
LSM5-204ENST00000409909 CHD8Q9HCK8 2581 aa18.2■□□□□ 0.5
LSM5-204ENST00000409909 DOCK4Q8N1I0 1966 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 E9PAM4 449 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 GIPC1O14908 333 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 MID1O15344 667 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 RNASEH1O60930 286 aaKnown RBP18.19■□□□□ 0.5
LSM5-204ENST00000409909 SRGAP2O75044 1071 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 SEMA4FO95754 770 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 GNSP15586 552 aa18.19■□□□□ 0.5
LSM5-204ENST00000409909 RFC1P35251 1148 aaPredicted RBP18.19■□□□□ 0.5
LSM5-204ENST00000409909 VASPP50552 380 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms