RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 PROCP04070 461 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 LDHBP07195 334 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 BGNP21810 368 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CCND1P24385 295 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 NEK2P51955 445 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 THOP1P52888 689 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CCL23P55773 120 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 NLRP5P59047 1200 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 RACK1P63244 317 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CBX3Q13185 183 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 MMRN1Q13201 1228 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 FAM26DQ5JW98 314 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 TBPL2Q6SJ96 375 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 RUFY4Q6ZNE9 571 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 HS2ST1Q7LGA3 356 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PEX26Q7Z412 305 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 IFT20Q8IY31 132 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 FIBCD1Q8N539 461 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 SNX19Q92543 992 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 LARP4BQ92615 738 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PPP1R36Q96LQ0 422 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CTAGE1Q96RT6 745 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 SORT1Q99523 831 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CARD9Q9H257 536 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 COQ3Q9NZJ6 369 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 NCKIPSDQ9NZQ3 722 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 EPS15L1Q9UBC2 864 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 SORL1Q92673 2214 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 A0A1W2PQJ5 194 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 TCRBV5S1A1TA0A578 114 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 HTR3EA5X5Y0 456 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 DDTLA6NHG4 134 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PSMA7O14818 248 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 GUCY1B2O75343 617 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 IPO7O95373 1038 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 GDF11O95390 407 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ALDOAP04075 364 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 TUBB4AP04350 444 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PGRP06401 933 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 KITP10721 976 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 GP1BBP13224 206 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CEACAM1P13688 526 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 GLRA2P23416 452 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 IL4RP24394 825 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CTNNA2P26232 953 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 KLRC2P26717 231 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CD6P30203 668 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 GEMIN4P57678 1058 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 DR1Q01658 176 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ALDH6A1Q02252 535 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 MVKQ03426 396 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 BNIP3Q12983 259 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PICALMQ13492 652 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 OASLQ15646 514 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 FAM26FQ5R3K3 315 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 NXNL2Q5VZ03 156 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ZNF410Q86VK4 478 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 SLC13A5Q86YT5 568 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PASD1Q8IV76 773 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CHST13Q8NET6 341 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 TOP1MTQ969P6 601 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 MSANTD3Q96H12 275 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ZNF184Q99676 751 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 PAIP2Q9BPZ3 127 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 TRIM4Q9C037 500 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 APOBEC3GQ9HC16 384 aaKnown RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 GOPCQ9HD26 462 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 HOMER3Q9NSC5 361 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 SLAMF8Q9P0V8 285 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 SPATA7Q9P0W8 599 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.22□□□□□ -1.89
RGPD3-202ENST00000409886 POMPQ9Y244 141 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 R4GN57 208 aa3.22□□□□□ -1.89
RGPD3-202ENST00000409886 ANKHD1Q8IWZ3 2542 aaKnown RBP3.21□□□□□ -1.89
RGPD3-202ENST00000409886 NEMP2A6NFY4 417 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 C9IYK1 514 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 TRIM77I1YAP6 450 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 HIP1O00291 1037 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 FCHO1O14526 889 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 TOR1BO14657 336 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 WDR46O15213 610 aaKnown RBP3.21□□□□□ -1.9
RGPD3-202ENST00000409886 GYG2O15488 501 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 JRKO75564 520 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 WISP1O95388 367 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 GLP2RO95838 553 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 EOMESO95936 686 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 ZNF806P0C7X5 589 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 LIG4P49917 911 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 MXI1P50539 228 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 PKNOX1P55347 436 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 AMPD3Q01432 767 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 GRM2Q14416 872 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 LBRQ14739 615 aaKnown RBP3.21□□□□□ -1.9
RGPD3-202ENST00000409886 ASPRV1Q53RT3 343 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 C11orf63Q6NUN7 778 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 TMEM53Q6P2H8 277 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 Q6ZNX1 250 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 DSG4Q86SJ6 1040 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms