RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 FNIP2Q9P278 1114 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 SEMA5BQ9P283 1151 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 ZMYND8Q9ULU4 1186 aaPredicted RBP4.97□□□□□ -1.61
CLK1-203ENST00000409769 NUP188Q5SRE5 1749 aa4.97□□□□□ -1.61
CLK1-203ENST00000409769 DHHO43323 396 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 IFIT2P09913 472 aaKnown RBP4.96□□□□□ -1.62
CLK1-203ENST00000409769 TMEM225BP0DP42 221 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 APEHP13798 732 aaKnown RBP4.96□□□□□ -1.62
CLK1-203ENST00000409769 TKTP29401 623 aaKnown RBP4.96□□□□□ -1.62
CLK1-203ENST00000409769 CCKBRP32239 447 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 NSUN2Q08J23 767 aaKnown RBP eCLIP4.96□□□□□ -1.62
CLK1-203ENST00000409769 GPS1Q13098 491 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 DNASE1L3Q13609 305 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 ZNF260Q3ZCT1 412 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 AASDHQ4L235 1098 aaPredicted RBP4.96□□□□□ -1.62
CLK1-203ENST00000409769 RAP1GAP2Q684P5 730 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 KRT27Q7Z3Y8 459 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 TTC5Q8N0Z6 440 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 SAMD3Q8N6K7 520 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 C12orf76Q8N812 135 aaPredicted RBP4.96□□□□□ -1.62
CLK1-203ENST00000409769 ARHGAP45Q92619 1136 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 CUL5Q93034 780 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 MMS19Q96T76 1030 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 PCDHAC1Q9H158 963 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 PDGFCQ9NRA1 345 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 SMC4Q9NTJ3 1288 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 TRNAU1APQ9NX07 287 aaKnown RBP4.96□□□□□ -1.62
CLK1-203ENST00000409769 ASAP1Q9ULH1 1129 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 DTNAQ9Y4J8 743 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 ARFGEF2Q9Y6D5 1785 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 KIF16BQ96L93 1317 aa4.96□□□□□ -1.62
CLK1-203ENST00000409769 PALLDQ8WX93 1383 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 FAM234BA2RU67 622 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 NDST3O95803 873 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 GLP2RO95838 553 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 TMEM191BP0C7N4 346 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 CYP2A6P11509 494 aaPredicted RBP4.95□□□□□ -1.62
CLK1-203ENST00000409769 ATF7P17544 494 aaPredicted RBP4.95□□□□□ -1.62
CLK1-203ENST00000409769 LARS2Q15031 903 aaKnown RBP4.95□□□□□ -1.62
CLK1-203ENST00000409769 RABEP1Q15276 862 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 CCDC30Q5VVM6 783 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 SERPINA13PQ6UXR4 307 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 G2E3Q7L622 706 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 SAMD14Q8IZD0 417 aaPredicted RBP4.95□□□□□ -1.62
CLK1-203ENST00000409769 CLASRPQ8N2M8 674 aaKnown RBP4.95□□□□□ -1.62
CLK1-203ENST00000409769 FSTL5Q8N475 847 aaPredicted RBP4.95□□□□□ -1.62
CLK1-203ENST00000409769 NANOGP1Q8N7R0 232 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 C11orf44Q8N8P7 122 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 ACRBPQ8NEB7 543 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 OVCA2Q8WZ82 227 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 KIAA1191Q96A73 305 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 TMEM41AQ96HV5 264 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 FZD4Q9ULV1 537 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 TNNQ9UQP3 1299 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 AFG3L2Q9Y4W6 797 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 USP16Q9Y5T5 823 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 ABCC4O15439 1325 aa4.95□□□□□ -1.62
CLK1-203ENST00000409769 PXDNLA1KZ92 1463 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 UBR3Q6ZT12 1888 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 ANKRD36CQ5JPF3 1778 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 BCORQ6W2J9 1755 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 TCERG1O14776 1098 aaKnown RBP4.94□□□□□ -1.62
CLK1-203ENST00000409769 DSCR3O14972 297 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 EXOC3O60645 756 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 NTSR2O95665 410 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 EIF2S2P20042 333 aaKnown RBP4.94□□□□□ -1.62
CLK1-203ENST00000409769 GPC5P78333 572 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 DEUP1Q05D60 604 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 GPR162Q16538 588 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 FAM187BQ17R55 369 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 TRIM71Q2Q1W2 868 aaKnown RBP4.94□□□□□ -1.62
CLK1-203ENST00000409769 KLHL22Q53GT1 634 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 TMTC4Q5T4D3 741 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 SYCP2LQ5T4T6 812 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 C20orf194Q5TEA3 1177 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 FAM90A2PQ658T7 463 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 GRHL2Q6ISB3 625 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 ATF7IPQ6VMQ6 1270 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 ZDHHC17Q8IUH5 632 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.94□□□□□ -1.62
CLK1-203ENST00000409769 C16orf52Q8NHV5 167 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 COQ8BQ96D53 544 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 CCDC17Q96LX7 622 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 CINPQ9BW66 212 aaPredicted RBP4.94□□□□□ -1.62
CLK1-203ENST00000409769 TTLL2Q9BWV7 592 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 TEX13AQ9BXU3 409 aaPredicted RBP4.94□□□□□ -1.62
CLK1-203ENST00000409769 CHMP4AQ9BY43 222 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 ARFGAP3Q9NP61 516 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 HELLSQ9NRZ9 838 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 SCAF8Q9UPN6 1271 aaKnown RBP4.94□□□□□ -1.62
CLK1-203ENST00000409769 CEP83Q9Y592 693 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 NUP98P52948 1817 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 C4BP0C0L5 1744 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 PTPRCP08575 1304 aa4.94□□□□□ -1.62
CLK1-203ENST00000409769 ADCY9O60503 1353 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 IBTKQ9P2D0 1353 aaPredicted RBP4.93□□□□□ -1.62
CLK1-203ENST00000409769 AFDNP55196 1824 aaKnown RBP4.93□□□□□ -1.62
CLK1-203ENST00000409769 TUBGCP6Q96RT7 1819 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 EP400Q96L91 3159 aa4.93□□□□□ -1.62
CLK1-203ENST00000409769 TMEM232C9JQI7 657 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms