RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 UAP1Q16222 522 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-204ENST00000409727 PCGF5Q86SE9 256 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 CCDC13Q8IYE1 715 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 ADAMTS19Q8TE59 1207 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 BHMTQ93088 406 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 PRICKLE1Q96MT3 831 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-204ENST00000409727 SPATA13Q96N96 652 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 AGAP3Q96P47 875 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 FAM129AQ9BZQ8 928 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 IGFLR1Q9H665 355 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 NOL6Q9H6R4 1146 aaKnown RBP12.77□□□□□ -0.37
CHMP3-204ENST00000409727 TMEM248Q9NWD8 314 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 KLHL8Q9P2G9 620 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-204ENST00000409727 TTLL3Q9Y4R7 772 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 MTCL1Q9Y4B5 1905 aaKnown RBP12.77□□□□□ -0.37
CHMP3-204ENST00000409727 DOCK6Q96HP0 2047 aa12.77□□□□□ -0.37
CHMP3-204ENST00000409727 GOLGA6BA6NDN3 693 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 DRGXA6NNA5 263 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 E7EVH7 732 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 ATP8B1O43520 1251 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 XYLBO75191 536 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 BANF1O75531 89 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 APRTP07741 180 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 PTPN3P26045 913 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 ZBTB17Q13105 803 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 MTA1Q13330 715 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 ADGRF1Q5T601 910 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 CFAP58Q5T655 872 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 PID1Q7Z2X4 250 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 ZNF567Q8N184 647 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 MREGQ8N565 214 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 ZCCHC9Q8N567 271 aaKnown RBP12.76□□□□□ -0.37
CHMP3-204ENST00000409727 LZTR1Q8N653 840 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 NAT8LQ8N9F0 302 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 UHMK1Q8TAS1 419 aaKnown RBP12.76□□□□□ -0.37
CHMP3-204ENST00000409727 ING5Q8WYH8 240 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 HMCESQ96FZ2 354 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 RBM15Q96T37 977 aaKnown RBP eCLIP12.76□□□□□ -0.37
CHMP3-204ENST00000409727 TXLNGYQ9BZA5 131 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 SEMA4AQ9H3S1 761 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 PIDD1Q9HB75 910 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 CFAP97Q9P2B7 532 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 SHOC2Q9UQ13 582 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 CLUHO75153 1309 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 SHROOM3Q8TF72 1996 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 WASH4PA8MWX3 477 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 HNRNPA1P09651 372 aaKnown RBP eCLIP12.76□□□□□ -0.37
CHMP3-204ENST00000409727 LMAN1P49257 510 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 SLMAPQ14BN4 828 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 RABGAP1LQ5R372 815 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 TMC5Q6UXY8 1006 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 OR2W6PQ8NHA6 318 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 APOL5Q9BWW9 433 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 PRKD2Q9BZL6 878 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 SAYSD1Q9NPB0 183 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 CCL26Q9Y258 94 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 PLAAQ9Y263 795 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 SH3BP1Q9Y3L3 701 aa12.76□□□□□ -0.37
CHMP3-204ENST00000409727 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.75□□□□□ -0.37
CHMP3-204ENST00000409727 RASA4BC9J798 803 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 ZBTB24O43167 697 aaPredicted RBP12.75□□□□□ -0.37
CHMP3-204ENST00000409727 RASA4O43374 803 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 MAFKO60675 156 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 OPHN1O60890 802 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 RAMP2O60895 175 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 ACSL3O95573 720 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 JCHAINP01591 159 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 PSMB4P28070 264 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 HOXA9P31269 272 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 AVPR1AP37288 418 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 KCNJ11Q14654 390 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 POLD3Q15054 466 aaPredicted RBP12.75□□□□□ -0.37
CHMP3-204ENST00000409727 ARHGAP15Q53QZ3 475 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 FNBP1LQ5T0N5 605 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 ACBD5Q5T8D3 534 aaPredicted RBP12.75□□□□□ -0.37
CHMP3-204ENST00000409727 AFMIDQ63HM1 303 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 LEKR1Q6ZMV7 388 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 TDHQ8IZJ6 230 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 UMODL1-AS1Q8N2C9 162 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 VN1R2Q8NFZ6 395 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 TIFAQ96CG3 184 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 C9orf72Q96LT7 481 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 ZIM3Q96PE6 472 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 RUFY1Q96T51 708 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 BRD8Q9H0E9 1235 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 CDC42EP4Q9H3Q1 356 aaKnown RBP12.75□□□□□ -0.37
CHMP3-204ENST00000409727 VIPAS39Q9H9C1 493 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 ZDHHC7Q9NXF8 308 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 ZNF212Q9UDV6 495 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 LSM7Q9UK45 103 aaKnown RBP12.75□□□□□ -0.37
CHMP3-204ENST00000409727 ATG2AQ2TAZ0 1938 aa12.75□□□□□ -0.37
CHMP3-204ENST00000409727 NYNRINQ9P2P1 1898 aaKnown RBP12.74□□□□□ -0.37
CHMP3-204ENST00000409727 J3KR12 359 aa12.74□□□□□ -0.37
CHMP3-204ENST00000409727 LEFTY2O00292 366 aa12.74□□□□□ -0.37
CHMP3-204ENST00000409727 AVILO75366 819 aa12.74□□□□□ -0.37
CHMP3-204ENST00000409727 MOSPD3O75425 235 aa12.74□□□□□ -0.37
CHMP3-204ENST00000409727 CCNB1P14635 433 aa12.74□□□□□ -0.37
CHMP3-204ENST00000409727 CCNCP24863 283 aa12.74□□□□□ -0.37
CHMP3-204ENST00000409727 NDST2P52849 883 aa12.74□□□□□ -0.37
CHMP3-204ENST00000409727 EPHA5P54756 1037 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms