RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 KIAA0391O15091 583 aaKnown RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 KLHL12Q53G59 568 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 UVRAGQ9P2Y5 699 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 DNMT3LQ9UJW3 386 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 PRODHO43272 600 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 ADCY6O43306 1168 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 DUSP4Q13115 394 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF544Q6NX49 715 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 BARGINQ6ZT62 677 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 TAF8Q7Z7C8 310 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 ULK2Q8IYT8 1036 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 REPS2Q8NFH8 660 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 UBASH3BQ8TF42 649 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 LENG1Q96BZ8 264 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 MRPL48Q96GC5 212 aaKnown RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 MPP4Q96JB8 637 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 CALR3Q96L12 384 aaKnown RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 CARD9Q9H257 536 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 LIMD1Q9UGP4 676 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 ITSN1Q15811 1721 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 CASP12Q6UXS9 341 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 SYT12Q8IV01 421 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 SPATA6LQ8N4H0 392 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 EPS8L3Q8TE67 593 aaKnown RBP8.56□□□□□ -1.04
SCN9A-203ENST00000409672 MCRS1Q96EZ8 462 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 NDNQ99608 321 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 ABHD16BQ9H3Z7 469 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 SH3GLB1Q9Y371 365 aa8.56□□□□□ -1.04
SCN9A-203ENST00000409672 PNMA8CA0A1B0GUJ8 204 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 TRIM64A6NGJ6 449 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 TMEM88BA6NKF7 163 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 TRPC5OSA6NMA1 111 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 SLC31A1O15431 190 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 INMTO95050 263 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 ATG7O95352 703 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 RARGP13631 454 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 PON1P27169 355 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 RPA1P27694 616 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 MAPK1P28482 360 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 DHPSP49366 369 aaPredicted RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 ATP13A4Q4VNC1 1196 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 TRAPPC11Q7Z392 1133 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 TXNRD3Q86VQ6 643 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 PACSIN1Q9BY11 444 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 CLDND1Q9NY35 253 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 CCDC167Q9P0B6 97 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 FSBPO95073 299 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 NTSR2O95665 410 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 PPATQ06203 517 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 MAPK11Q15759 364 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 NFE2Q16621 373 aaPredicted RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 MPPE1Q53F39 396 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 DNAJC11Q9NVH1 559 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 IQCF5A8MTL0 148 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 HNRNPRO43390 633 aaKnown RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 SRP54P61011 504 aaKnown RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 RAB14P61106 215 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 KBTBD12Q3ZCT8 623 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 INTS5Q6P9B9 1019 aaKnown RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 RASGRP3Q8IV61 690 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF611Q8N823 705 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 WDR24Q96S15 920 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 C7orf25Q9BPX7 421 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 KLQ9UEF7 1012 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 CPED1A4D0V7 1026 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 C1QTNF3-AMACRE9PGA6 284 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 MTSS1O43312 755 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF500O60304 480 aaPredicted RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 VAPBO95292 243 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 ALDH4A1P30038 563 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 CYLC2Q14093 348 aaPredicted RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF655Q8N720 491 aaPredicted RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 BRINP2Q9C0B6 783 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 RIBC2Q9H4K1 309 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 SEMA4BQ9NPR2 832 aaPredicted RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 MRPS7Q9Y2R9 242 aaKnown RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 ITIH2P19823 946 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 PSMB9P28065 219 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 CEBPGP53567 150 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 EXOSC10Q01780 885 aaKnown RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 RETSATQ6NUM9 610 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 POLNQ7Z5Q5 900 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 PACS2Q86VP3 889 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 SENP8Q96LD8 212 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 SIKE1Q9BRV8 207 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 MRPS26Q9BYN8 205 aaKnown RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 CATSPERZQ9NTU4 200 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 INTS10Q9NVR2 710 aaKnown RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 BLOC1S6Q9UL45 172 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF609O15014 1411 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 SAMD9LQ8IVG5 1584 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 KLHL2O95198 593 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 COX7A2P14406 83 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 SERPINA4P29622 427 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 COILP38432 576 aaPredicted RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 TUFMP49411 452 aaKnown RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 HNRNPH2P55795 449 aaKnown RBP8.55□□□□□ -1.04
SCN9A-203ENST00000409672 GNA13Q14344 377 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 CRY1Q16526 586 aa8.55□□□□□ -1.04
SCN9A-203ENST00000409672 SEL1L3Q68CR1 1132 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms