RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 CALCOCO2Q13137 446 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 LRIT3Q3SXY7 679 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 FAM153CQ494X1 144 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 CCDC25Q86WR0 208 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 NPAS3Q8IXF0 933 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 TDRD5Q8NAT2 981 aaKnown RBP16.06■□□□□ 0.16
SHANK2-204ENST00000409530 OR52K2Q8NGK3 314 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 SLCO2A1Q92959 643 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 SNF8Q96H20 258 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 PWWP2AQ96N64 755 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 ARGLU1Q9NWB6 273 aaPredicted RBP16.06■□□□□ 0.16
SHANK2-204ENST00000409530 TMEM248Q9NWD8 314 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 FAM153AQ9UHL3 310 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 DRG1Q9Y295 367 aaKnown RBP16.06■□□□□ 0.16
SHANK2-204ENST00000409530 WNT6Q9Y6F9 365 aa16.06■□□□□ 0.16
SHANK2-204ENST00000409530 MYO18AQ92614 2054 aaKnown RBP16.06■□□□□ 0.16
SHANK2-204ENST00000409530 IGLV3-10A0A075B6K4 115 aa16.05■□□□□ 0.16
SHANK2-204ENST00000409530 RAMP2O60895 175 aa16.05■□□□□ 0.16
SHANK2-204ENST00000409530 DDX6P26196 483 aaKnown RBP eCLIP16.05■□□□□ 0.16
SHANK2-204ENST00000409530 RPL22P35268 128 aaKnown RBP16.05■□□□□ 0.16
SHANK2-204ENST00000409530 ACVRL1P37023 503 aa16.05■□□□□ 0.16
SHANK2-204ENST00000409530 ITGA8P53708 1063 aa16.05■□□□□ 0.16
SHANK2-204ENST00000409530 GALNT2Q10471 571 aa16.05■□□□□ 0.16
SHANK2-204ENST00000409530 CCDC85BQ15834 202 aaPredicted RBP16.05■□□□□ 0.16
SHANK2-204ENST00000409530 WDR93Q6P2C0 686 aa16.05■□□□□ 0.16
SHANK2-204ENST00000409530 Q6ZNB5 142 aa16.05■□□□□ 0.16
SHANK2-204ENST00000409530 BZW1Q7L1Q6 419 aaKnown RBP16.05■□□□□ 0.16
SHANK2-204ENST00000409530 FBXO25Q8TCJ0 367 aa16.05■□□□□ 0.16
SHANK2-204ENST00000409530 PPM1EQ8WY54 764 aa16.05■□□□□ 0.16
SHANK2-204ENST00000409530 FGF13Q92913 245 aa16.05■□□□□ 0.16
SHANK2-204ENST00000409530 ADAM7Q9H2U9 754 aa16.05■□□□□ 0.16
SHANK2-204ENST00000409530 NOL6Q9H6R4 1146 aaKnown RBP16.05■□□□□ 0.16
SHANK2-204ENST00000409530 USP29Q9HBJ7 922 aa16.05■□□□□ 0.16
SHANK2-204ENST00000409530 PCDH9Q9HC56 1237 aa16.05■□□□□ 0.16
SHANK2-204ENST00000409530 GRHL1Q9NZI5 618 aa16.05■□□□□ 0.16
SHANK2-204ENST00000409530 PPARGC1AQ9UBK2 798 aaKnown RBP16.05■□□□□ 0.16
SHANK2-204ENST00000409530 NEU2Q9Y3R4 380 aa16.05■□□□□ 0.16
SHANK2-204ENST00000409530 MTCH2Q9Y6C9 303 aa16.05■□□□□ 0.16
SHANK2-204ENST00000409530 A0A0D9SEW6 157 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 TYW5A2RUC4 315 aaKnown RBP16.04■□□□□ 0.16
SHANK2-204ENST00000409530 H0Y626 953 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 C1RP00736 705 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 PRKD1Q15139 912 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-204ENST00000409530 ARHGEF18Q6ZSZ5 1173 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 OR7D4Q8NG98 312 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 PABPC5Q96DU9 382 aaKnown RBP16.04■□□□□ 0.16
SHANK2-204ENST00000409530 AGAP3Q96P47 875 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 SPON2Q9BUD6 331 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 CLEC1BQ9P126 229 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 KLHL8Q9P2G9 620 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-204ENST00000409530 RAB21Q9UL25 225 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 NUP210Q8TEM1 1887 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-204ENST00000409530 BCLAF3A2AJT9 711 aaKnown RBP16.04■□□□□ 0.16
SHANK2-204ENST00000409530 RASA4BC9J798 803 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 RASA4O43374 803 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 MX2P20592 715 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 ECHS1P30084 290 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 HTR7P34969 479 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 ZBTB17Q13105 803 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 CDH18Q13634 790 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 POLD3Q15054 466 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-204ENST00000409530 CCNI2Q6ZMN8 369 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-204ENST00000409530 GPR149Q86SP6 731 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 WFDC5Q8TCV5 224 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 ZFYVE19Q96K21 471 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 DDX50Q9BQ39 737 aaKnown RBP16.04■□□□□ 0.16
SHANK2-204ENST00000409530 MUC3BQ9H195 1237 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 SP110Q9HB58 689 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 RAB6BQ9NRW1 208 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 FAM114A2Q9NRY5 505 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 ACTL7AQ9Y615 435 aa16.04■□□□□ 0.16
SHANK2-204ENST00000409530 BRWD1Q9NSI6 2320 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 DRGXA6NNA5 263 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 J3KR12 359 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 NEBLO76041 1014 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 RHOCP08134 193 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 H2AFXP16104 143 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-204ENST00000409530 MCM3P25205 808 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 ETFBP38117 255 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 GAD2Q05329 585 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 PPIDQ08752 370 aaKnown RBP16.03■□□□□ 0.16
SHANK2-204ENST00000409530 XRCC4Q13426 336 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 TRIM68Q6AZZ1 485 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 IL31Q6EBC2 164 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 SYDE1Q6ZW31 735 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-204ENST00000409530 Q7L0L9 218 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 CCDC13Q8IYE1 715 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 ANKRD7Q92527 254 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 HDAC11Q96DB2 347 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 RSPRY1Q96DX4 576 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 TMA16Q96EY4 203 aaKnown RBP16.03■□□□□ 0.16
SHANK2-204ENST00000409530 LINC00597Q9H2U6 94 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-204ENST00000409530 A0A1B0GVM2 712 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 TCAF2A6NFQ2 919 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 NEDD8-MDP1E9PL57 170 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 H3BQ06 376 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-204ENST00000409530 ERLIN1O75477 346 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 GLDCP23378 1020 aa16.03■□□□□ 0.16
SHANK2-204ENST00000409530 GBP2P32456 591 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms