RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 BTN2A3PQ96KV6 586 aa13.82□□□□□ -0.2
LIMS1-204ENST00000409441 ASB2Q96Q27 587 aa13.82□□□□□ -0.2
LIMS1-204ENST00000409441 LINC00597Q9H2U6 94 aa13.82□□□□□ -0.2
LIMS1-204ENST00000409441 TMPRSS4Q9NRS4 437 aa13.82□□□□□ -0.2
LIMS1-204ENST00000409441 THG1LQ9NWX6 298 aaKnown RBP13.82□□□□□ -0.2
LIMS1-204ENST00000409441 PRKAG3Q9UGI9 489 aa13.82□□□□□ -0.2
LIMS1-204ENST00000409441 XPO7Q9UIA9 1087 aaKnown RBP13.82□□□□□ -0.2
LIMS1-204ENST00000409441 DRG1Q9Y295 367 aaKnown RBP13.82□□□□□ -0.2
LIMS1-204ENST00000409441 ZNF510Q9Y2H8 683 aa13.82□□□□□ -0.2
LIMS1-204ENST00000409441 SPTBN5Q9NRC6 3674 aaKnown RBP13.81□□□□□ -0.2
LIMS1-204ENST00000409441 C5orf42Q9H799 3197 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 hCG_1818297A0A087WSY0 165 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 LOC730098B7Z3J9 87 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 RIPK2O43353 540 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 LIASO43766 372 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 ACSL4O60488 711 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 BMP1P13497 986 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 PSMC3P17980 439 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 IL1R2P27930 398 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 MDH1P40925 334 aaKnown RBP13.81□□□□□ -0.2
LIMS1-204ENST00000409441 ATP1A2P50993 1020 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 MLLT6P55198 1093 aaPredicted RBP13.81□□□□□ -0.2
LIMS1-204ENST00000409441 PPP2R2AP63151 447 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 USP4Q13107 963 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 MTA1Q13330 715 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 BYSLQ13895 437 aaKnown RBP13.81□□□□□ -0.2
LIMS1-204ENST00000409441 BOLA3Q53S33 107 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 DNAJC21Q5F1R6 531 aaKnown RBP13.81□□□□□ -0.2
LIMS1-204ENST00000409441 TFDP3Q5H9I0 405 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 ZFYVE27Q5T4F4 411 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 C6orf118Q5T5N4 469 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 ADGRF1Q5T601 910 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 ERMARDQ5T6L9 678 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 MFSD7Q6UXD7 560 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 ADHFE1Q8IWW8 467 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 BBS7Q8IWZ6 715 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 KIAA1958Q8N8K9 716 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 NTAN1Q96AB6 310 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 HAPLN3Q96S86 360 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 PEBP4Q96S96 227 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 MAGEB5Q9BZ81 275 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 ROPN1BQ9BZX4 212 aaPredicted RBP13.81□□□□□ -0.2
LIMS1-204ENST00000409441 SIK2Q9H0K1 926 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 STMN4Q9H169 189 aaPredicted RBP13.81□□□□□ -0.2
LIMS1-204ENST00000409441 CENPHQ9H3R5 247 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 ZWILCHQ9H900 591 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 ROPN1Q9HAT0 212 aaPredicted RBP13.81□□□□□ -0.2
LIMS1-204ENST00000409441 KCNK12Q9HB15 430 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 TBC1D14Q9P2M4 693 aa13.81□□□□□ -0.2
LIMS1-204ENST00000409441 DOCK8Q8NF50 2099 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 DENND4AQ7Z401 1863 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 GOLGA6L7A0A1B0GV03 622 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 SLC9A3R1O14745 358 aaPredicted RBP13.8□□□□□ -0.2
LIMS1-204ENST00000409441 ADCY8P40145 1251 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 CDKN2BP42772 138 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 AIF1P55008 147 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 SLC25A11Q02978 314 aaKnown RBP13.8□□□□□ -0.2
LIMS1-204ENST00000409441 FCHO2Q0JRZ9 810 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 SLC29A2Q14542 456 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 LLGL1Q15334 1064 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 KCNT1Q5JUK3 1230 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 TXNRD3NBQ6F5E7 133 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 NADSYN1Q6IA69 706 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 CYP4V2Q6ZWL3 525 aaPredicted RBP13.8□□□□□ -0.2
LIMS1-204ENST00000409441 YAF2Q8IY57 180 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 ADGRG2Q8IZP9 1017 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 OSCP1Q8WVF1 389 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 NXPE3Q969Y0 559 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 C1orf74Q96LT6 269 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 TRMT61BQ9BVS5 477 aaKnown RBP13.8□□□□□ -0.2
LIMS1-204ENST00000409441 SEMA4AQ9H3S1 761 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 CNOT10Q9H9A5 744 aaKnown RBP13.8□□□□□ -0.2
LIMS1-204ENST00000409441 DUS2Q9NX74 493 aaKnown RBP13.8□□□□□ -0.2
LIMS1-204ENST00000409441 IGSF9Q9P2J2 1179 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 ANAPC5Q9UJX4 755 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 STOML2Q9UJZ1 356 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 FZD10Q9ULW2 581 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 NOVA2Q9UNW9 492 aaKnown RBP13.8□□□□□ -0.2
LIMS1-204ENST00000409441 WNT6Q9Y6F9 365 aa13.8□□□□□ -0.2
LIMS1-204ENST00000409441 PI4K2BG5E9Z4 385 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 TP73O15350 636 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 LATS1O95835 1130 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 ITGA8P53708 1063 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 ZP2Q05996 745 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 SCAPQ12770 1279 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 GRM2Q14416 872 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 TAZQ16635 292 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 KCTD19Q17RG1 926 aaPredicted RBP13.79□□□□□ -0.2
LIMS1-204ENST00000409441 SMTNL2Q2TAL5 461 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 ATP13A4Q4VNC1 1196 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 MS4A13Q5J8X5 152 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 EFHC2Q5JST6 749 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 ANKS1BQ7Z6G8 1248 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 RELL1Q8IUW5 271 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 SLC44A3Q8N4M1 653 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 TTC13Q8NBP0 860 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 DEPDC1BQ8WUY9 529 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 NKD2Q969F2 451 aaPredicted RBP13.79□□□□□ -0.2
LIMS1-204ENST00000409441 ZFYVE19Q96K21 471 aa13.79□□□□□ -0.2
LIMS1-204ENST00000409441 FAM83CQ9BQN1 747 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms