RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 EHD1Q9H4M9 534 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 LIN28AQ9H9Z2 209 aaKnown RBP10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 SATB2Q9UPW6 733 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 EYSQ5T1H1 3165 aa10.87□□□□□ -0.67
NIF3L1-204ENST00000409357 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 H3BMQ9 156 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 M0QX08 132 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 RNF103O00237 685 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 TPPPO94811 219 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 C1QAP02745 245 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 MCF2P10911 925 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 JUNBP17275 347 aaPredicted RBP10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 HK2P52789 917 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 BAATQ14032 418 aaPredicted RBP10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 IKBKEQ14164 716 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 HABP4Q5JVS0 413 aaKnown RBP10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 GPATCH4Q5T3I0 446 aaKnown RBP10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 C16orf46Q6P387 395 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 TRIM72Q6ZMU5 477 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 ADGRF4Q8IZF3 695 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 LILRA2Q8N149 483 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 FIBCD1Q8N539 461 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 LILRB4Q8NHJ6 448 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 CALML6Q8TD86 181 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 CRYGNQ8WXF5 182 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 GJA10Q969M2 543 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 NACC2Q96BF6 587 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 TAMM41Q96BW9 452 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 COG8Q96MW5 612 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 CDH19Q9H159 772 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 RMND5AQ9H871 391 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 GPN2Q9H9Y4 310 aaPredicted RBP10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 ALG13Q9NP73 1137 aaKnown RBP10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 ACP6Q9NPH0 428 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 XPNPEP3Q9NQH7 507 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 EBF1Q9UH73 591 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 DNPEPQ9ULA0 475 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 CPQQ9Y646 472 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 LTBP2Q14767 1821 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 EMSYQ7Z589 1322 aa10.86□□□□□ -0.67
NIF3L1-204ENST00000409357 ZNF839A8K0R7 811 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 MEI4A8MW99 385 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 ADAMTS4O75173 837 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 ATE1O95260 518 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 TFPTP0C1Z6 253 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 KRT5P13647 590 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 AKR1A1P14550 325 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 PRKCHP24723 683 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 ADCYAP1R1P41586 468 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 KRT6CP48668 564 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 IDH3AP50213 366 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 SERPINB9P50453 376 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 VAMP7P51809 220 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 AP3B2Q13367 1082 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 GK3PQ14409 553 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 ZNF846Q147U1 533 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 CYTH1Q15438 398 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 TKFCQ3LXA3 575 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 MDH1BQ5I0G3 518 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 TEDDM1Q5T9Z0 273 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 KRT80Q6KB66 452 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 ZNF746Q6NUN9 644 aaPredicted RBP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 POTEGQ6S5H5 508 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 DENND5BQ6ZUT9 1274 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 C1orf186Q6ZWK4 172 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 CYS1Q717R9 158 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 PGAM4Q8N0Y7 254 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 UBR7Q8N806 425 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 FBXO36Q8NEA4 188 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 PDCD6IPQ8WUM4 868 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 CPT1BQ92523 772 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 PRO3102Q9H379 93 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 JMJD4Q9H9V9 463 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 CXorf21Q9HAI6 301 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 TUFT1Q9NNX1 390 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 LOXHD1Q8IVV2 1947 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 C7orf72A4D263 438 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 GOLGA8RI6L899 631 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 ZNF195O14628 629 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 DYNC1LI2O43237 492 aaPredicted RBP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 PPP1R11O60927 126 aaPredicted RBP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 ZC3H11AO75152 810 aaKnown RBP eCLIP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 RFPL1O75677 317 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 FAM13AO94988 1023 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 MYF6P23409 242 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 GABRB2P47870 512 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 HARS2P49590 506 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 GPC3P51654 580 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 YWHAGP61981 247 aaKnown RBP eCLIP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 MRPS5P82675 430 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 CTBSQ01459 385 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 CHRNEQ04844 493 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 FLOT2Q14254 428 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 QRICH1Q2TAL8 776 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 LIN9Q5TKA1 542 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 PDPK2PQ6A1A2 396 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 OGFOD2Q6N063 350 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 RINT1Q6NUQ1 792 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 PAOXQ6QHF9 649 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms