RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 RBMS1P29558 406 aaKnown RBP13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 NUDT1P36639 197 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 RPS24P62847 133 aaKnown RBP13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 ADIGQ0VDE8 80 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 KCNMA1Q12791 1236 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 ELAVL3Q14576 367 aaKnown RBP13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 SLC39A14Q15043 492 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 NFKBIBQ15653 356 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 ARL13BQ3SXY8 428 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 FSCBQ5H9T9 825 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 PITRM1Q5JRX3 1037 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 BSPRYQ5W0U4 402 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 NADSYN1Q6IA69 706 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 ATG14Q6ZNE5 492 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 TRIM69Q86WT6 500 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 SLC9A9Q8IVB4 645 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 SLC4A11Q8NBS3 891 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 TMEM145Q8NBT3 493 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 HJURPQ8NCD3 748 aaPredicted RBP13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 GOLGA5Q8TBA6 731 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 MAPK15Q8TD08 544 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 ATXN7L3BQ96GX2 97 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 HEXIM2Q96MH2 286 aaKnown RBP13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 BLZF1Q9H2G9 400 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 KDM4CQ9H3R0 1056 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 NLGN3Q9NZ94 848 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 PCDHGA8Q9Y5G5 932 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 ENTPD2Q9Y5L3 495 aa13.3□□□□□ -0.28
CHRNA1-203ENST00000409219 PRAMEF26H0Y7S4 382 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 ACSL4O60488 711 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 ALPPL2P10696 532 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 ITGB6P18564 788 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 STK19P49842 368 aaPredicted RBP13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 CDH18Q13634 790 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 SETMARQ53H47 684 aaPredicted RBP13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 AGBL4Q5VU57 503 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 ARHGAP17Q68EM7 881 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 MSANTD2Q6P1R3 559 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 ZNF574Q6ZN55 896 aaPredicted RBP13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 CARNMT1Q8N4J0 409 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 ANKRD52Q8NB46 1076 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 IFI44Q8TCB0 444 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 TMEM174Q8WUU8 243 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 KLHDC7BQ96G42 594 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 RPL10LQ96L21 214 aaKnown RBP13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 MYOCQ99972 504 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 ABCG4Q9H172 646 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 ABCC13Q9NSE7 274 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 KLHL11Q9NVR0 708 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 USP9XQ93008 2570 aaPredicted RBP13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 RP1P56715 2156 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 SLC7A4O43246 635 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 EFSO43281 561 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 SUV39H1O43463 412 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 SLC11A2P49281 568 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 RAD23BP54727 409 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 SGO2Q562F6 1265 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 CLEC14AQ86T13 490 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 TATDN2Q93075 761 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 SPAG5Q96R06 1193 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 CCNL2Q96S94 520 aaPredicted RBP13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 DNAI2Q9GZS0 605 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 USP29Q9HBJ7 922 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 SARDHQ9UL12 918 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 ATXN7L1Q9ULK2 861 aaPredicted RBP13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 CEP83Q9Y592 693 aa13.29□□□□□ -0.28
CHRNA1-203ENST00000409219 TYW5A2RUC4 315 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 XPO1O14980 1071 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 NEBLO76041 1014 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 TRIM49P0CI25 452 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 TRIM49CP0CI26 452 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 PRLRP16471 622 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 GCLMP48507 274 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 NUMBP49757 651 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 SLC8A3P57103 927 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 ECT2LQ008S8 904 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 PPP3CAQ08209 521 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 GOLGA7BQ2TAP0 167 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 KMT5BQ4FZB7 885 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 CEP135Q66GS9 1140 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 NUGGCQ68CJ6 796 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 UNC45BQ8IWX7 931 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 APCDD1Q8J025 514 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 SLC22A18ASQ8N1D0 253 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 OR13H1Q8NG92 308 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 EXTL1Q92935 676 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 CALN1Q9BXU9 219 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 NUCKS1Q9H1E3 243 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 KCTD10Q9H3F6 313 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 LRRC4Q9HBW1 653 aa13.28□□□□□ -0.28
CHRNA1-203ENST00000409219 SPTAN1Q13813 2472 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 K7ESM1 405 aa13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 LUC7L3O95232 432 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 AFPP02771 609 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 NR3C1P04150 777 aa13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 DUSP3P51452 185 aaPredicted RBP13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 VAMP7P51809 220 aa13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 DAOAP59103 153 aa13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 CNTN1Q12860 1018 aa13.27□□□□□ -0.29
CHRNA1-203ENST00000409219 CUL4BQ13620 913 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms