RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ARHGAP42A6NI28 874 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 TBC1D4O60343 1298 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 UGT1A9O60656 530 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 ALDH1A2O94788 518 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 CSH1P0DML2 217 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 CSH2P0DML3 217 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 PYGBP11216 843 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 SERPINB9P50453 376 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 EFEMP1Q12805 493 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 SLC39A5Q6ZMH5 540 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 TAS1R1Q7RTX1 841 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 ANKRD33Q7Z3H0 272 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 ARHGAP12Q8IWW6 846 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 OR52K1Q8NGK4 314 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 LRRC8CQ8TDW0 803 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 MTBPQ96DY7 904 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 SLC39A13Q96H72 371 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 UGT1A7Q9HAW7 530 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 UGT1A10Q9HAW8 530 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 UGT1A8Q9HAW9 530 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 OLA1Q9NTK5 396 aaKnown RBP25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 COMMD8Q9NX08 183 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 CLIC5Q9NZA1 410 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 GRID1Q9ULK0 1009 aa25.25■■□□□ 1.63
DNMT3A-206ENST00000406659 SHROOM3Q8TF72 1996 aa25.24■■□□□ 1.63
DNMT3A-206ENST00000406659 HAPLN1P10915 354 aaPredicted RBP25.24■■□□□ 1.63
DNMT3A-206ENST00000406659 PSEN1P49768 467 aa25.24■■□□□ 1.63
DNMT3A-206ENST00000406659 RGS9BPQ6ZS82 235 aa25.24■■□□□ 1.63
DNMT3A-206ENST00000406659 C14orf80Q86SX3 495 aa25.24■■□□□ 1.63
DNMT3A-206ENST00000406659 C2orf15Q8WU43 125 aaKnown RBP25.24■■□□□ 1.63
DNMT3A-206ENST00000406659 TTC17Q96AE7 1141 aa25.24■■□□□ 1.63
DNMT3A-206ENST00000406659 OXNAD1Q96HP4 312 aaPredicted RBP25.24■■□□□ 1.63
DNMT3A-206ENST00000406659 APOPT1Q96IL0 206 aa25.24■■□□□ 1.63
DNMT3A-206ENST00000406659 PITPNM3Q9BZ71 974 aa25.24■■□□□ 1.63
DNMT3A-206ENST00000406659 BFARQ9NZS9 450 aa25.24■■□□□ 1.63
DNMT3A-206ENST00000406659 PSMD3O43242 534 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 RPL10AP62906 217 aaKnown RBP25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 TAF10Q12962 218 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 KCTD11Q693B1 232 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 SPATA21Q7Z572 469 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 TMEM173Q86WV6 379 aaPredicted RBP25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 DNAAF3Q8N9W5 541 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 USP33Q8TEY7 942 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 CDKL2Q92772 493 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 GRAMD1AQ96CP6 724 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 SLC39A8Q9C0K1 460 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 CASS4Q9NQ75 786 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 USP12O75317 370 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 UPP2O95045 317 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 OAS1P00973 400 aaKnown RBP25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 POLBP06746 335 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 CCNB1P14635 433 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 OLIG2Q13516 323 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 CRYMQ14894 314 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 PIK3R6Q5UE93 754 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 PRSS55Q6UWB4 352 aaPredicted RBP25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 ARHGAP36Q6ZRI8 547 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 SH2D5Q6ZV89 423 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 RTL3Q8N8U3 475 aaKnown RBP25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 ATP6V0D2Q8N8Y2 350 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 ZSCAN18Q8TBC5 510 aaPredicted RBP25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 BCL7CQ8WUZ0 217 aaPredicted RBP25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 DPF3Q92784 378 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 MLPHQ9BV36 600 aaPredicted RBP25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 CRISPLD1Q9H336 500 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 SLC17A7Q9P2U7 560 aa25.23■■□□□ 1.63
DNMT3A-206ENST00000406659 CCT8L1PA6NM43 557 aa25.22■■□□□ 1.63
DNMT3A-206ENST00000406659 VNN2O95498 520 aa25.22■■□□□ 1.63
DNMT3A-206ENST00000406659 ADRA1DP25100 572 aa25.22■■□□□ 1.63
DNMT3A-206ENST00000406659 ALDH7A1P49419 539 aaKnown RBP25.22■■□□□ 1.63
DNMT3A-206ENST00000406659 DUSP4Q13115 394 aa25.22■■□□□ 1.63
DNMT3A-206ENST00000406659 TRIP4Q15650 581 aaPredicted RBP25.22■■□□□ 1.63
DNMT3A-206ENST00000406659 C10orf120Q5SQS8 335 aa25.22■■□□□ 1.63
DNMT3A-206ENST00000406659 ARTNQ5T4W7 220 aa25.22■■□□□ 1.63
DNMT3A-206ENST00000406659 LRRC40Q9H9A6 602 aa25.22■■□□□ 1.63
DNMT3A-206ENST00000406659 MPP6Q9NZW5 540 aa25.22■■□□□ 1.63
DNMT3A-206ENST00000406659 VANGL2Q9ULK5 521 aa25.22■■□□□ 1.63
DNMT3A-206ENST00000406659 COPEO14579 308 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 ALADP13716 330 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 NEK3P51956 506 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 TLE2Q04725 743 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 DNAJC3Q13217 504 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 NAB1Q13506 487 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 SPANXN3Q5MJ09 141 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 FAM47EQ6ZV65 393 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 MARK2Q7KZI7 788 aaKnown RBP25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 MARCH2Q9P0N8 246 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 BRCA2P51587 3418 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 WASH4PA8MWX3 477 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 MATN3O15232 486 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 MAFKO60675 156 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 TBX18O95935 607 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 CNTFP26441 200 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 NPY2RP49146 381 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 BMPR2Q13873 1038 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 RASIP1Q5U651 963 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 LRRC49Q8IUZ0 686 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 UNC5BQ8IZJ1 945 aa25.21■■□□□ 1.63
DNMT3A-206ENST00000406659 CNTD1Q8N815 330 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms