RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 DUSP6Q16828 381 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ANKRD20A2Q5SQ80 823 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 RARS2Q5T160 578 aaKnown RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 ANKRD20A1Q5TYW2 823 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ANKRD20A3Q5VUR7 823 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ANKRD22Q5VYY1 191 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 NLRP14Q86W24 1093 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 CCDC13Q8IYE1 715 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 LZTR1Q8N653 840 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 BBOF1Q8ND07 529 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 VN1R2Q8NFZ6 395 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 UHMK1Q8TAS1 419 aaKnown RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 ITFG1Q8TB96 612 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ADAMTS19Q8TE59 1207 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 SH3RF2Q8TEC5 729 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 CPT1BQ92523 772 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ZNF707Q96C28 371 aaPredicted RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 PABPC5Q96DU9 382 aaKnown RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 MRPL38Q96DV4 380 aaKnown RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 HMCESQ96FZ2 354 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ZSWIM3Q96MP5 696 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 SPON2Q9BUD6 331 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 KLC2Q9H0B6 622 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ADAM7Q9H2U9 754 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ETNK1Q9HBU6 452 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 TMEM248Q9NWD8 314 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ZDHHC7Q9NXF8 308 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 PAK5Q9P286 719 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 PPARGC1AQ9UBK2 798 aaKnown RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 IPO11Q9UI26 975 aaKnown RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 IGLV3-10A0A075B6K4 115 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 A0A0A0MRY4 1105 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 A0A0D9SEW6 157 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 TYW5A2RUC4 315 aaKnown RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 RASA4BC9J798 803 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 BHMG1C9JSJ3 638 aaPredicted RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 LEFTY2O00292 366 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 TP73O15350 636 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 LINC01565O15544 149 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 RASA4O43374 803 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 TBL1XO60907 577 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 METTL18O95568 372 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 OLFM2O95897 454 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 CEBPBP17676 345 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 HOXA9P31269 272 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 GAD2Q05329 585 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 PPIDQ08752 370 aaKnown RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 WASHC5Q12768 1159 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ZBTB17Q13105 803 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 MTA1Q13330 715 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ZNF177Q13360 481 aaPredicted RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 TCEAL5Q5H9L2 206 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ARTNQ5T4W7 220 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 RNASEH2BQ5TBB1 312 aaKnown RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 IL31Q6EBC2 164 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 HIBCHQ6NVY1 386 aaPredicted RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 RTL10Q7L3V2 364 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 TMC3Q7Z5M5 1100 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ARHGAP12Q8IWW6 846 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 BBS7Q8IWZ6 715 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 PPIL6Q8IXY8 311 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ZNF683Q8IZ20 524 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ZNF567Q8N184 647 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 CARNMT1Q8N4J0 409 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 TSEN2Q8NCE0 465 aaKnown RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 DDI1Q8WTU0 396 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 TMA16Q96EY4 203 aaKnown RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 PRICKLE1Q96MT3 831 aaPredicted RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 SPATA13Q96N96 652 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 RBM15Q96T37 977 aaKnown RBP eCLIP3.8□□□□□ -1.84e-8■■■■■ 30.1
RTN4-208ENST00000404909 DDX50Q9BQ39 737 aaKnown RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 FUT8Q9BYC5 575 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 LMAN2LQ9H0V9 348 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ZNF576Q9H609 170 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 TASP1Q9H6P5 420 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 SP110Q9HB58 689 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 PIH1D1Q9NWS0 290 aaKnown RBP3.8□□□□□ -1.8
RTN4-208ENST00000404909 DONSONQ9NYP3 566 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 RAD54BQ9Y620 910 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 C5orf60A6NFR6 353 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ARHGAP42A6NI28 874 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 DRGXA6NNA5 263 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 H0Y626 953 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 J3KR12 359 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ZNF197O14709 1029 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 MOSPD3O75425 235 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 BANF1O75531 89 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 GCATO75600 419 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 PRAMEF12O95522 483 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 FGF19O95750 216 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 CCNB1P14635 433 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 PTPN3P26045 913 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 PSMB4P28070 264 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 BMP8BP34820 402 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ACVRL1P37023 503 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 ETFBP38117 255 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 EPHA5P54756 1037 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 SLC7A9P82251 487 aa3.8□□□□□ -1.8
RTN4-208ENST00000404909 CAV1Q03135 178 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms